RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ARHGAP1Q07960 439 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 ATAT1Q5SQI0 421 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 GPR158Q5T848 1215 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 ZNF470Q6ECI4 717 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 LAYNQ6UX15 382 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 SPATA21Q7Z572 469 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 TDRD5Q8NAT2 981 aaKnown RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 MDM1Q8TC05 714 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 MIPOL1Q8TD10 442 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 LRRN4Q8WUT4 740 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 APOC4-APOC2K7ER74 178 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 ZSCAN9O15535 394 aaPredicted RBP9.46□□□□□ -0.89
GGA3-223ENST00000621870 APOC2P02655 101 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 ENO1P06733 434 aaKnown RBP9.46□□□□□ -0.89
GGA3-223ENST00000621870 GLI1P08151 1106 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 ZSCAN5DPP0CG00 497 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 MGAT1P26572 445 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 SLC8A1P32418 973 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 RAP1GDS1P52306 607 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 ZNF143P52747 638 aaPredicted RBP9.46□□□□□ -0.89
GGA3-223ENST00000621870 LILRA4P59901 499 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 POLR2LP62875 67 aaKnown RBP9.46□□□□□ -0.89
GGA3-223ENST00000621870 MTA1Q13330 715 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 PREPLQ4J6C6 727 aaPredicted RBP9.46□□□□□ -0.89
GGA3-223ENST00000621870 TMEM63BQ5T3F8 832 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 ZNF618Q5T7W0 954 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 AADACL2Q6P093 401 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 GLT6D1Q7Z4J2 308 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 NPAS4Q8IUM7 802 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 SIAH1Q8IUQ4 282 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 SYTL1Q8IYJ3 562 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 TOP6BLQ8N6T0 577 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 EPS8L3Q8TE67 593 aaKnown RBP9.46□□□□□ -0.89
GGA3-223ENST00000621870 TMEM159Q96B96 161 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 TEPSINQ96N21 525 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 GANQ9H2C0 597 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 SEMA4AQ9H3S1 761 aa9.46□□□□□ -0.89
GGA3-223ENST00000621870 RUVBL2Q9Y230 463 aaKnown RBP9.46□□□□□ -0.89
GGA3-223ENST00000621870 ADAMTS3O15072 1205 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 MSI1O43347 362 aaKnown RBP9.46□□□□□ -0.9
GGA3-223ENST00000621870 C22orf31O95567 290 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 PECAM1P16284 738 aaPredicted RBP9.46□□□□□ -0.9
GGA3-223ENST00000621870 MSH3P20585 1137 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 SSTR1P30872 391 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 SP2Q02086 613 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 MGAT5Q09328 741 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 WASHC5Q12768 1159 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 MMRN1Q13201 1228 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 MAPRE2Q15555 327 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 PDCD2Q16342 344 aaPredicted RBP9.46□□□□□ -0.9
GGA3-223ENST00000621870 MEA1Q16626 185 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 SAPCD2Q86UD0 394 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 CFAP52Q8N1V2 620 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 NDRG1Q92597 394 aaKnown RBP9.46□□□□□ -0.9
GGA3-223ENST00000621870 GRAMD1AQ96CP6 724 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 TUBGCP3Q96CW5 907 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 FCRL2Q96LA5 508 aaPredicted RBP9.46□□□□□ -0.9
GGA3-223ENST00000621870 KREMEN1Q96MU8 473 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 DUSP16Q9BY84 665 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 MRPL46Q9H2W6 279 aaKnown RBP9.46□□□□□ -0.9
GGA3-223ENST00000621870 TRIM45Q9H8W5 580 aaPredicted RBP9.46□□□□□ -0.9
GGA3-223ENST00000621870 ACTR5Q9H9F9 607 aaPredicted RBP9.46□□□□□ -0.9
GGA3-223ENST00000621870 MPP6Q9NZW5 540 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.46□□□□□ -0.9
GGA3-223ENST00000621870 F5P12259 2224 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 PEAK1Q9H792 1746 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 ARL5CA6NH57 179 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 CCL5P13501 91 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 MDH1P40925 334 aaKnown RBP9.46□□□□□ -0.9
GGA3-223ENST00000621870 MAXP61244 160 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 MRPS5P82675 430 aaKnown RBP9.46□□□□□ -0.9
GGA3-223ENST00000621870 CREMQ03060 361 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 OVGP1Q12889 678 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 SLC10A6Q3KNW5 377 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 RASIP1Q5U651 963 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 GET4Q7L5D6 327 aaPredicted RBP9.46□□□□□ -0.9
GGA3-223ENST00000621870 TRAPPC5Q8IUR0 188 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 JADE3Q92613 823 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 MAGEB10Q96LZ2 347 aaPredicted RBP9.46□□□□□ -0.9
GGA3-223ENST00000621870 PAFAH2Q99487 392 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 MIR1-1HGQ9H1L0 117 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 ACTR8Q9H981 624 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 IL1RL2Q9HB29 575 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 SYTL2Q9HCH5 934 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 TRHDEQ9UKU6 1024 aa9.46□□□□□ -0.9
GGA3-223ENST00000621870 C5orf58C9J3I9 102 aa9.45□□□□□ -0.9
GGA3-223ENST00000621870 GUCA1CO95843 209 aa9.45□□□□□ -0.9
GGA3-223ENST00000621870 GOT1P17174 413 aa9.45□□□□□ -0.9
GGA3-223ENST00000621870 DDX5P17844 614 aaKnown RBP9.45□□□□□ -0.9
GGA3-223ENST00000621870 MATKP42679 507 aa9.45□□□□□ -0.9
GGA3-223ENST00000621870 MAPK9P45984 424 aa9.45□□□□□ -0.9
GGA3-223ENST00000621870 PLA2G4AP47712 749 aa9.45□□□□□ -0.9
GGA3-223ENST00000621870 NR2C2P49116 596 aa9.45□□□□□ -0.9
GGA3-223ENST00000621870 SEC24CP53992 1094 aa9.45□□□□□ -0.9
GGA3-223ENST00000621870 ABCE1P61221 599 aaKnown RBP9.45□□□□□ -0.9
GGA3-223ENST00000621870 NPY5RQ15761 445 aa9.45□□□□□ -0.9
GGA3-223ENST00000621870 NPNTQ6UXI9 565 aa9.45□□□□□ -0.9
GGA3-223ENST00000621870 CTU1Q7Z7A3 348 aaKnown RBP9.45□□□□□ -0.9
GGA3-223ENST00000621870 RASAL3Q86YV0 1011 aa9.45□□□□□ -0.9
GGA3-223ENST00000621870 C12orf56Q8IXR9 622 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms