RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ZSCAN32Q9NX65 697 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 DUS2Q9NX74 493 aaKnown RBP5.46□□□□□ -1.54
SHMT1-211ENST00000618902 MARCH2Q9P0N8 246 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 CFAP97Q9P2B7 532 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 WDR35Q9P2L0 1181 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 SFMBT1Q9UHJ3 866 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 DNMT3LQ9UJW3 386 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 TMEM59LQ9UK28 342 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 LSM7Q9UK45 103 aaKnown RBP5.46□□□□□ -1.54
SHMT1-211ENST00000618902 ADAM21Q9UKJ8 722 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 WNT6Q9Y6F9 365 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 HELZP42694 1942 aaKnown RBP5.46□□□□□ -1.54
SHMT1-211ENST00000618902 MIA3Q5JRA6 1907 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 SLC12A8A0AV02 714 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 SOWAHDA6NJG2 315 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 BTNL10A8MVZ5 291 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 TMCO5BA8MYB1 307 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 SPECC1L-ADORA2AF8WAN1 911 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 GOLGA8SH3BPF8 625 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 PJA2O43164 708 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 IRAK2O43187 625 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 HOXC11O43248 304 aaPredicted RBP5.45□□□□□ -1.54
SHMT1-211ENST00000618902 TIMM44O43615 452 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 DAB1O75553 588 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 STC2O76061 302 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 IGLV3-27P01718 113 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 SERPING1P05155 500 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 GLI1P08151 1106 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 IRF1P10914 325 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 PYGBP11216 843 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 CHRNB1P11230 501 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 TNFAIP3P21580 790 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 RRM1P23921 792 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 ACTN2P35609 894 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 TNFRSF4P43489 277 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 CXCL12P48061 93 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 SOX9P48436 509 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 IFNAR2P48551 515 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 VAV2P52735 878 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 ATXN1P54253 815 aaKnown RBP5.45□□□□□ -1.54
SHMT1-211ENST00000618902 RPL7AP62424 266 aaKnown RBP5.45□□□□□ -1.54
SHMT1-211ENST00000618902 MRPS21P82921 87 aaKnown RBP5.45□□□□□ -1.54
SHMT1-211ENST00000618902 FOXK2Q01167 660 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 ZNF252P-AS1Q0IIN9 211 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 BYSLQ13895 437 aaKnown RBP5.45□□□□□ -1.54
SHMT1-211ENST00000618902 UBXN2BQ14CS0 331 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 PPP2R5EQ16537 467 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 PPP1R15BQ5SWA1 713 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 CCDC122Q5T0U0 273 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 MPP7Q5T2T1 576 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 SH3PXD2AQ5TCZ1 1133 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 BTBD8Q5XKL5 378 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 ACAD10Q6JQN1 1059 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 PPP1R2P3Q6NXS1 205 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 TXNDC11Q6PKC3 985 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 TRIM72Q6ZMU5 477 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 BNIPLQ7Z465 357 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 KIAA1328Q86T90 577 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 SPATS2Q86XZ4 545 aaKnown RBP5.45□□□□□ -1.54
SHMT1-211ENST00000618902 CPNE8Q86YQ8 564 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 MIB1Q86YT6 1006 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 ZDHHC17Q8IUH5 632 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 BBS7Q8IWZ6 715 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 DEFB106AQ8N104 65 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 MMGT1Q8N4V1 131 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 EMC1Q8N766 993 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 ZBTB44Q8NCP5 570 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 TTC16Q8NEE8 873 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 TTC8Q8TAM2 541 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 ATRIPQ8WXE1 791 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 NKD2Q969F2 451 aaPredicted RBP5.45□□□□□ -1.54
SHMT1-211ENST00000618902 NT5C3BQ969T7 300 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 FAM149B1Q96BN6 582 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 C18orf8Q96DM3 657 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 ARHGEF26Q96DR7 871 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 SLC39A13Q96H72 371 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 LOXL4Q96JB6 756 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 FCRL2Q96LA5 508 aaPredicted RBP5.45□□□□□ -1.54
SHMT1-211ENST00000618902 NOX5Q96PH1 765 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 TBCBQ99426 244 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 PACSIN1Q9BY11 444 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 SLC2A11Q9BYW1 496 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 MAGEB5Q9BZ81 275 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 NACA2Q9H009 215 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 ISCUQ9H1K1 167 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 RETREG1Q9H6L5 497 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 ECT2Q9H8V3 914 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 FBRSL1Q9HCM7 1045 aaKnown RBP5.45□□□□□ -1.54
SHMT1-211ENST00000618902 LZTFL1Q9NQ48 299 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 TMPRSS4Q9NRS4 437 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 HEBP1Q9NRV9 189 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 ABCC13Q9NSE7 274 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 SEPT11Q9NVA2 429 aaKnown RBP5.45□□□□□ -1.54
SHMT1-211ENST00000618902 ASNSD1Q9NWL6 643 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 RRN3Q9NYV6 651 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 GTSE1Q9NYZ3 720 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 ADAM22Q9P0K1 906 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 MARK1Q9P0L2 795 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 EBF1Q9UH73 591 aa5.45□□□□□ -1.54
SHMT1-211ENST00000618902 ADAMTS1Q9UHI8 967 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms