RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 TNFP01375 233 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 ITGB6P18564 788 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 GATMP50440 423 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 CCR3P51677 355 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 TFDP3Q5H9I0 405 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 IGSF21Q96ID5 467 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 PANX2Q96RD6 677 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 A0A0U1RQF3 1178 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 TRUB2O95900 331 aaKnown RBP11.2□□□□□ -0.62
POLR2A-209ENST00000617998 TYK2P29597 1187 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 OXTRP30559 389 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 GRB10Q13322 594 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 TMEM259Q4ZIN3 620 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 C16orf46Q6P387 395 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 FAM43BQ6ZT52 329 aaPredicted RBP11.2□□□□□ -0.62
POLR2A-209ENST00000617998 FAM35AQ86V20 835 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 KLHDC7BQ96G42 594 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 ZNF333Q96JL9 665 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 FAM117AQ9C073 453 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 AHSPQ9NZD4 102 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 CLUHO75153 1309 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 EML1O00423 815 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 FGGP02679 453 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 PSMC3P17980 439 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 TYMPP19971 482 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 FAM228AQ86W67 206 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 VSIG1Q86XK7 387 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 RXFP2Q8WXD0 754 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 GMLQ99445 158 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 FICDQ9BVA6 458 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 EIF2AQ9BY44 585 aaKnown RBP11.2□□□□□ -0.62
POLR2A-209ENST00000617998 POLR1EQ9GZS1 481 aaKnown RBP11.2□□□□□ -0.62
POLR2A-209ENST00000617998 ATP6V1HQ9UI12 483 aa11.2□□□□□ -0.62
POLR2A-209ENST00000617998 A0A1W2PQH9 124 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 MMP13P45452 471 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 CCT5P48643 541 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 EIF3BP55884 814 aaKnown RBP11.19□□□□□ -0.62
POLR2A-209ENST00000617998 CLEC16AQ2KHT3 1053 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 CRTC3Q6UUV7 619 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 C10orf67Q8IYJ2 551 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 ARHGAP24Q8N264 748 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 Q8N9G6 341 aaPredicted RBP11.19□□□□□ -0.62
POLR2A-209ENST00000617998 LRRC8CQ8TDW0 803 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 PANX3Q96QZ0 392 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 FBXL12Q9NXK8 326 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 NSMCE4AQ9NXX6 385 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 CCDC66A2RUB6 948 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 LRRC14BA6NHZ5 514 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 TSPAN1O60635 241 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 STBD1O95210 358 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 ITGB5P18084 799 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 MTF1Q14872 753 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 PKN1Q16512 942 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 VCXQ9H320 206 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 IFT172Q9UG01 1749 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 TLX1P31314 330 aaPredicted RBP11.19□□□□□ -0.62
POLR2A-209ENST00000617998 CTSOP43234 321 aaPredicted RBP11.19□□□□□ -0.62
POLR2A-209ENST00000617998 USP10Q14694 798 aaKnown RBP11.19□□□□□ -0.62
POLR2A-209ENST00000617998 INTS6LQ5JSJ4 861 aaKnown RBP11.19□□□□□ -0.62
POLR2A-209ENST00000617998 FBXO2Q9UK22 296 aaPredicted RBP11.19□□□□□ -0.62
POLR2A-209ENST00000617998 COLEC10Q9Y6Z7 277 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 ZNF217O75362 1048 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 SLC25A14O95258 325 aaPredicted RBP11.19□□□□□ -0.62
POLR2A-209ENST00000617998 STAU1O95793 577 aaKnown RBP11.19□□□□□ -0.62
POLR2A-209ENST00000617998 CHRNA1P02708 482 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 COX7A2P14406 83 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 CYP11B1P15538 503 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 DR1Q01658 176 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 OC90Q02509 493 aaPredicted RBP11.19□□□□□ -0.62
POLR2A-209ENST00000617998 CYP2A13Q16696 494 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 NDUFA9Q16795 377 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 ANKRD20A8PQ5CZ79 823 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 EEF1DP3Q658K8 133 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 C17orf80Q9BSJ5 609 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 MLPHQ9BV36 600 aaPredicted RBP11.19□□□□□ -0.62
POLR2A-209ENST00000617998 GPATCH2LQ9NWQ4 482 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 HCN3Q9P1Z3 774 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 MASP1P48740 699 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 ATP13A4Q4VNC1 1196 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 TAS1R2Q8TE23 839 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 PCDHGA4Q9Y5G9 962 aa11.19□□□□□ -0.62
POLR2A-209ENST00000617998 ARHGEF28Q8N1W1 1705 aaKnown RBP11.18□□□□□ -0.62
POLR2A-209ENST00000617998 RFXAPO00287 272 aa11.18□□□□□ -0.62
POLR2A-209ENST00000617998 RNF40O75150 1001 aa11.18□□□□□ -0.62
POLR2A-209ENST00000617998 RHOP08100 348 aa11.18□□□□□ -0.62
POLR2A-209ENST00000617998 ESRRAP11474 423 aaPredicted RBP11.18□□□□□ -0.62
POLR2A-209ENST00000617998 U2AF2P26368 475 aaKnown RBP eCLIP11.18□□□□□ -0.62
POLR2A-209ENST00000617998 RPA3P35244 121 aaPredicted RBP11.18□□□□□ -0.62
POLR2A-209ENST00000617998 SPIRE1Q08AE8 756 aa11.18□□□□□ -0.62
POLR2A-209ENST00000617998 LPIN1Q14693 890 aa11.18□□□□□ -0.62
POLR2A-209ENST00000617998 SV2AQ7L0J3 742 aa11.18□□□□□ -0.62
POLR2A-209ENST00000617998 NIFKQ9BYG3 293 aaKnown RBP11.18□□□□□ -0.62
POLR2A-209ENST00000617998 SMYD3Q9H7B4 428 aa11.18□□□□□ -0.62
POLR2A-209ENST00000617998 TUBGCP4Q9UGJ1 667 aa11.18□□□□□ -0.62
POLR2A-209ENST00000617998 MYO5BQ9ULV0 1848 aa11.18□□□□□ -0.62
POLR2A-209ENST00000617998 CLDN5O00501 218 aa11.18□□□□□ -0.62
POLR2A-209ENST00000617998 PDK2Q15119 407 aa11.18□□□□□ -0.62
POLR2A-209ENST00000617998 VPS37AQ8NEZ2 397 aa11.18□□□□□ -0.62
POLR2A-209ENST00000617998 OTULINQ96BN8 352 aa11.18□□□□□ -0.62
POLR2A-209ENST00000617998 LGMNQ99538 433 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms