RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 TEX264Q9Y6I9 313 aa19.71■□□□□ 0.75
MMP28-204ENST00000615136 TNFRSF10BO14763 440 aa19.71■□□□□ 0.75
MMP28-204ENST00000615136 GCATO75600 419 aa19.71■□□□□ 0.75
MMP28-204ENST00000615136 ATP2A2P16615 1042 aaKnown RBP19.71■□□□□ 0.75
MMP28-204ENST00000615136 KRT4P19013 534 aa19.71■□□□□ 0.75
MMP28-204ENST00000615136 GRIA1P42261 906 aa19.71■□□□□ 0.75
MMP28-204ENST00000615136 GPR15P49685 360 aa19.71■□□□□ 0.75
MMP28-204ENST00000615136 MNAT1P51948 309 aa19.71■□□□□ 0.75
MMP28-204ENST00000615136 SLC5A3P53794 718 aa19.71■□□□□ 0.75
MMP28-204ENST00000615136 SCAPQ12770 1279 aa19.71■□□□□ 0.75
MMP28-204ENST00000615136 DNAJC3Q13217 504 aa19.71■□□□□ 0.75
MMP28-204ENST00000615136 SNCBQ16143 134 aa19.71■□□□□ 0.75
MMP28-204ENST00000615136 FAM47EQ6ZV65 393 aa19.71■□□□□ 0.75
MMP28-204ENST00000615136 SPATA2LQ8IUW3 424 aaPredicted RBP19.71■□□□□ 0.75
MMP28-204ENST00000615136 URGCPQ8TCY9 931 aa19.71■□□□□ 0.75
MMP28-204ENST00000615136 DQX1Q8TE96 717 aaKnown RBP19.71■□□□□ 0.75
MMP28-204ENST00000615136 HTR3CQ8WXA8 447 aa19.71■□□□□ 0.75
MMP28-204ENST00000615136 TMEM161AQ9NX61 479 aa19.71■□□□□ 0.75
MMP28-204ENST00000615136 SCN5AQ14524 2016 aa19.7■□□□□ 0.74
MMP28-204ENST00000615136 SPAG6O75602 509 aa19.7■□□□□ 0.74
MMP28-204ENST00000615136 ERCC2P18074 760 aa19.7■□□□□ 0.74
MMP28-204ENST00000615136 GRIK1P39086 918 aa19.7■□□□□ 0.74
MMP28-204ENST00000615136 HEATR6Q6AI08 1181 aaKnown RBP19.7■□□□□ 0.74
MMP28-204ENST00000615136 ZNF534Q76KX8 674 aa19.7■□□□□ 0.74
MMP28-204ENST00000615136 ANKLE1Q8NAG6 615 aa19.7■□□□□ 0.74
MMP28-204ENST00000615136 TFB1MQ8WVM0 346 aaKnown RBP19.7■□□□□ 0.74
MMP28-204ENST00000615136 IRGQQ8WZA9 623 aa19.7■□□□□ 0.74
MMP28-204ENST00000615136 SPOCK2Q92563 424 aa19.7■□□□□ 0.74
MMP28-204ENST00000615136 ALKBH8Q96BT7 664 aaKnown RBP19.7■□□□□ 0.74
MMP28-204ENST00000615136 CYTH2Q99418 400 aa19.7■□□□□ 0.74
MMP28-204ENST00000615136 TKTL2Q9H0I9 626 aa19.7■□□□□ 0.74
MMP28-204ENST00000615136 PHTF1Q9UMS5 762 aa19.7■□□□□ 0.74
MMP28-204ENST00000615136 MYO18AQ92614 2054 aaKnown RBP19.7■□□□□ 0.74
MMP28-204ENST00000615136 CHUKO15111 745 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 EDF1O60869 148 aaKnown RBP19.69■□□□□ 0.74
MMP28-204ENST00000615136 MSH2P43246 934 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 MAGEA6P43360 314 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 CXCR3P49682 368 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 PLEKHG4Q58EX7 1191 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 NPWQ8N729 165 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 LRRC8CQ8TDW0 803 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 TRIM56Q9BRZ2 755 aaKnown RBP19.69■□□□□ 0.74
MMP28-204ENST00000615136 FRMD8Q9BZ67 464 aaPredicted RBP19.69■□□□□ 0.74
MMP28-204ENST00000615136 KLC2Q9H0B6 622 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 PRDM12Q9H4Q4 367 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 ECT2Q9H8V3 914 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 PLAC1Q9HBJ0 212 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 ABI2Q9NYB9 513 aaPredicted RBP19.69■□□□□ 0.74
MMP28-204ENST00000615136 NUDT5Q9UKK9 219 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 TMEM189-UBE2V1I3L0A0 370 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 OAZ2O95190 189 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 PAX3P23760 479 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 AP1B1Q10567 949 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 PAFAH1B3Q15102 231 aaKnown RBP19.69■□□□□ 0.74
MMP28-204ENST00000615136 PRKD1Q15139 912 aaPredicted RBP19.69■□□□□ 0.74
MMP28-204ENST00000615136 MAPRE1Q15691 268 aaKnown RBP19.69■□□□□ 0.74
MMP28-204ENST00000615136 ANKRD20A2Q5SQ80 823 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 ANKRD20A1Q5TYW2 823 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 HHATQ5VTY9 493 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 ANKRD20A3Q5VUR7 823 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 LVRNQ6Q4G3 990 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 DENND5BQ6ZUT9 1274 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 SCN4BQ8IWT1 228 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 TTC9BQ8N6N2 239 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 P2RY11Q96G91 374 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 PGLYRP2Q96PD5 576 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 FTHL17Q9BXU8 183 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 ZCWPW1Q9H0M4 648 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 WDCPQ9H6R7 721 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 NMUR1Q9HB89 426 aa19.69■□□□□ 0.74
MMP28-204ENST00000615136 TCRBV9S1A1TA0A576 114 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 PBX3P40426 434 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 SKIV2L2P42285 1042 aaKnown RBP19.68■□□□□ 0.74
MMP28-204ENST00000615136 SCD5Q86SK9 330 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 BANPQ8N9N5 519 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 MAGEC3Q8TD91 643 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 SCLYQ96I15 445 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 CASD1Q96PB1 797 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 FAM193BQ96PV7 902 aaPredicted RBP19.68■□□□□ 0.74
MMP28-204ENST00000615136 GPR62Q9BZJ7 368 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 PNPLA8Q9NP80 782 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 SLCO1B3Q9NPD5 702 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 TM9SF1O15321 606 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 GBP2P32456 591 aaPredicted RBP19.68■□□□□ 0.74
MMP28-204ENST00000615136 TPI1P60174 286 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 YWHAGP61981 247 aaKnown RBP eCLIP19.68■□□□□ 0.74
MMP28-204ENST00000615136 DDR2Q16832 855 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 VARS2Q5ST30 1063 aaKnown RBP19.68■□□□□ 0.74
MMP28-204ENST00000615136 CEP57Q86XR8 500 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 VPS52Q8N1B4 723 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 SCML4Q8N228 414 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 MPP5Q8N3R9 675 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 CCNYQ8ND76 341 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 SLC44A1Q8WWI5 657 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 DEFB118Q96PH6 123 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 SFMBT1Q9UHJ3 866 aa19.68■□□□□ 0.74
MMP28-204ENST00000615136 MRPL42Q9Y6G3 142 aaKnown RBP19.68■□□□□ 0.74
MMP28-204ENST00000615136 MYO16Q9Y6X6 1858 aa19.67■□□□□ 0.74
MMP28-204ENST00000615136 A0A0A0MRY4 1105 aa19.67■□□□□ 0.74
MMP28-204ENST00000615136 RNF103O00237 685 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms