RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 AAGABQ6PD74 315 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 ANKRD23Q86SG2 305 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 OR52B2Q96RD2 323 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 MPHOSPH6Q99547 160 aaKnown RBP12.08□□□□□ -0.48
CDH5-208ENST00000614547 PCDHAC1Q9H158 963 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 ADNPQ9H2P0 1102 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 PFDN4Q9NQP4 134 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 ZNF70Q9UC06 446 aaPredicted RBP12.08□□□□□ -0.48
CDH5-208ENST00000614547 ZNF180Q9UJW8 692 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 CDYLQ9Y232 598 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 ATP6AP2A0A1C7CYW4 349 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 FAM149AA5PLN7 773 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 SDR42E2A6NKP2 422 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 ZNF839A8K0R7 811 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 ATP6AP2O75787 350 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 TRUB2O95900 331 aaKnown RBP12.07□□□□□ -0.48
CDH5-208ENST00000614547 SLC4A1P02730 911 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 PIK3R1P27986 724 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 HMGCS2P54868 508 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 CBX3Q13185 183 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 GOLGA7BQ2TAP0 167 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 MYLK3Q32MK0 819 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 AGKQ53H12 422 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 LRRC38Q5VT99 294 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 PATL1Q86TB9 770 aaKnown RBP12.07□□□□□ -0.48
CDH5-208ENST00000614547 ZFP28Q8NHY6 868 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 PDCD6IPQ8WUM4 868 aaKnown RBP12.07□□□□□ -0.48
CDH5-208ENST00000614547 ATP6V1E2Q96A05 226 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 RMND5BQ96G75 393 aaPredicted RBP12.07□□□□□ -0.48
CDH5-208ENST00000614547 B3GNT5Q9BYG0 378 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 EFCAB1Q9HAE3 211 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 PXMP2Q9NR77 195 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 C1orf232A0A0U1RR37 186 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 SIGLEC16A6NMB1 481 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 TGM2P21980 687 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 ADORA2AP29274 412 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 GRIA2P42262 883 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 STX1BP61266 288 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 ITKQ08881 620 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 LPIN1Q14693 890 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 CATSPER1Q8NEC5 780 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 NLGN2Q8NFZ4 835 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 EBNA1BP2Q99848 306 aaKnown RBP12.07□□□□□ -0.48
CDH5-208ENST00000614547 CNPY3Q9BT09 278 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 MAGEB5Q9BZ81 275 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 ING2Q9H160 280 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 EURLQ9NYK6 297 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 DCDC2Q9UHG0 476 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 PSMD13Q9UNM6 376 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 PARP4Q9UKK3 1724 aaKnown RBP12.07□□□□□ -0.48
CDH5-208ENST00000614547 COL14A1Q05707 1796 aaKnown RBP12.07□□□□□ -0.48
CDH5-208ENST00000614547 POLBP06746 335 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 CHRNGP07510 517 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 ACO1P21399 889 aaKnown RBP12.07□□□□□ -0.48
CDH5-208ENST00000614547 RPL10P27635 214 aaKnown RBP12.07□□□□□ -0.48
CDH5-208ENST00000614547 HPCAP84074 193 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 LDLRAP1Q5SW96 308 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 GPR107Q5VW38 600 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 FAM47BQ8NA70 645 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 DDI1Q8WTU0 396 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 RNF157Q96PX1 679 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 TSR3Q9UJK0 312 aaKnown RBP12.07□□□□□ -0.48
CDH5-208ENST00000614547 RUVBL2Q9Y230 463 aaKnown RBP12.07□□□□□ -0.48
CDH5-208ENST00000614547 PLIN4Q96Q06 1357 aa12.07□□□□□ -0.48
CDH5-208ENST00000614547 PLSCR1O15162 318 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 DHX15O43143 795 aaKnown RBP12.06□□□□□ -0.48
CDH5-208ENST00000614547 MT-ND1P03886 318 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 CKMT2P17540 419 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 STT3AP46977 705 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 STAT5BP51692 787 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 SLC18A1P54219 525 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 MRPS5P82675 430 aaKnown RBP12.06□□□□□ -0.48
CDH5-208ENST00000614547 CA9Q16790 459 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 MICALL2Q8IY33 904 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 DSELQ8IZU8 1212 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 TMIGD2Q96BF3 282 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 MED10Q9BTT4 135 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 FAM96AQ9H5X1 160 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 FARP1Q9Y4F1 1045 aaPredicted RBP12.06□□□□□ -0.48
CDH5-208ENST00000614547 GRK2P25098 689 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 SPRP35270 261 aaPredicted RBP12.06□□□□□ -0.48
CDH5-208ENST00000614547 SLC9A4Q6AI14 798 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 FBXL19Q6PCT2 694 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 SNRNP25Q9BV90 132 aaKnown RBP12.06□□□□□ -0.48
CDH5-208ENST00000614547 CCDC106Q9BWC9 280 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 NOL11Q9H8H0 719 aaKnown RBP12.06□□□□□ -0.48
CDH5-208ENST00000614547 CHST12Q9NRB3 414 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 PTTG2Q9NZH5 202 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 RSL24D1Q9UHA3 163 aaKnown RBP12.06□□□□□ -0.48
CDH5-208ENST00000614547 PSAT1Q9Y617 370 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 LTBP4Q8N2S1 1624 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 A0A1B0GUL6 1792 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 PAPSS1O43252 624 aaPredicted RBP12.06□□□□□ -0.48
CDH5-208ENST00000614547 DNAJA2O60884 412 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 TIPRLO75663 272 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 RFPL1O75677 317 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 LSM8O95777 96 aaKnown RBP12.06□□□□□ -0.48
CDH5-208ENST00000614547 ETV4P43268 484 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 CLCN3P51790 818 aa12.06□□□□□ -0.48
CDH5-208ENST00000614547 GPR162Q16538 588 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms