RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 RHBDF2Q6PJF5 856 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 RFX8Q6ZV50 586 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 PCGF5Q86SE9 256 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 PRUNE1Q86TP1 453 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 ZC3H18Q86VM9 953 aaKnown RBP9.21□□□□□ -0.93
CCDC47-207ENST00000612558 UNC45BQ8IWX7 931 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 GPR65Q8IYL9 337 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 IQCKQ8N0W5 287 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 FIBCD1Q8N539 461 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 GLIS1Q8NBF1 620 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 STKLD1Q8NE28 680 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 CASP10Q92851 521 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 FBXO32Q969P5 355 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 SERPINB11Q96P15 392 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 HAPLN3Q96S86 360 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 TXLNGYQ9BZA5 131 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 FOXP3Q9BZS1 431 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 OSBPL2Q9H1P3 480 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 ANLNQ9NQW6 1124 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 ARHGEF4Q9NR80 690 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 OLA1Q9NTK5 396 aaKnown RBP9.21□□□□□ -0.93
CCDC47-207ENST00000612558 OSER1Q9NX31 292 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 GMIPQ9P107 970 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 OR12D3Q9UGF7 316 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 SFMBT1Q9UHJ3 866 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 TPX2Q9ULW0 747 aaKnown RBP9.21□□□□□ -0.93
CCDC47-207ENST00000612558 INSL6Q9Y581 213 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 GREB1Q4ZG55 1949 aa9.21□□□□□ -0.93
CCDC47-207ENST00000612558 MYO16Q9Y6X6 1858 aa9.21□□□□□ -0.94
CCDC47-207ENST00000612558 BCLAF3A2AJT9 711 aaKnown RBP9.2□□□□□ -0.94
CCDC47-207ENST00000612558 SLC38A8A6NNN8 435 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 FAM72CH0Y354 149 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 I6L893 689 aaPredicted RBP9.2□□□□□ -0.94
CCDC47-207ENST00000612558 DNALI1O14645 258 aaPredicted RBP9.2□□□□□ -0.94
CCDC47-207ENST00000612558 RRP9O43818 475 aaKnown RBP9.2□□□□□ -0.94
CCDC47-207ENST00000612558 RARGP13631 454 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 ETS1P14921 441 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 ATF6P18850 670 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 HSD17B3P37058 310 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 TPI1P60174 286 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 GBE1Q04446 702 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 SLC10A2Q12908 348 aaPredicted RBP9.2□□□□□ -0.94
CCDC47-207ENST00000612558 RAB33AQ14088 237 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 HSP90B2PQ58FF3 399 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 TMEM240Q5SV17 173 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 FAM72AQ5TYM5 149 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 FAM72DQ6L9T8 149 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 HIBCHQ6NVY1 386 aaPredicted RBP9.2□□□□□ -0.94
CCDC47-207ENST00000612558 CEP128Q6ZU80 1094 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 PDZD4Q76G19 769 aaPredicted RBP9.2□□□□□ -0.94
CCDC47-207ENST00000612558 FAM72BQ86X60 149 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 CDKL3Q8IVW4 592 aaPredicted RBP9.2□□□□□ -0.94
CCDC47-207ENST00000612558 VPS52Q8N1B4 723 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 FAM71DQ8N9W8 422 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 RTP4Q96DX8 246 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 TTLL2Q9BWV7 592 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 ADAM7Q9H2U9 754 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 C10orf88Q9H8K7 445 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 USP29Q9HBJ7 922 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 MED4Q9NPJ6 270 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.2□□□□□ -0.94
CCDC47-207ENST00000612558 MRPL17Q9NRX2 175 aaKnown RBP9.2□□□□□ -0.94
CCDC47-207ENST00000612558 ETNK2Q9NVF9 386 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 DTLQ9NZJ0 730 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 NUDT5Q9UKK9 219 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 TLR6Q9Y2C9 796 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 SSX2IPQ9Y2D8 614 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 ATP8A1Q9Y2Q0 1164 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 KCNU1A8MYU2 1149 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 HACD1B0YJ81 288 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 AGPSO00116 658 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 DCLK1O15075 740 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 KCNN4O15554 427 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 SEC24AO95486 1093 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 ZDHHC11BP0C7U3 371 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 SLC2A3P11169 496 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 ERCC2P18074 760 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 HTR7P34969 479 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 RPL22P35268 128 aaKnown RBP9.2□□□□□ -0.94
CCDC47-207ENST00000612558 ACTN2P35609 894 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 PMS2P54278 862 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 CREMQ03060 361 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 MORF4L2Q15014 288 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 PAFAH1B3Q15102 231 aaKnown RBP9.2□□□□□ -0.94
CCDC47-207ENST00000612558 PDK1Q15118 436 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 UAP1Q16222 522 aaPredicted RBP9.2□□□□□ -0.94
CCDC47-207ENST00000612558 SLC45A4Q5BKX6 768 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 RASIP1Q5U651 963 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 C7orf61Q8IZ16 206 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 ZNF276Q8N554 614 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 PHOSPHO2Q8TCD6 241 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 GIPC2Q8TF65 315 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 UBLCP1Q8WVY7 318 aaPredicted RBP9.2□□□□□ -0.94
CCDC47-207ENST00000612558 OVCA2Q8WZ82 227 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 HERVK_113Q902F9 699 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 CLP1Q92989 425 aaKnown RBP9.2□□□□□ -0.94
CCDC47-207ENST00000612558 ZIM3Q96PE6 472 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 RUFY1Q96T51 708 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 RAD9AQ99638 391 aa9.2□□□□□ -0.94
CCDC47-207ENST00000612558 UBE2OQ9C0C9 1292 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms