RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 LMNAP02545 664 aaKnown RBP15.14■□□□□ 0.01
CDH1-213ENST00000612417 NEFHP12036 1026 aa15.14■□□□□ 0.01
CDH1-213ENST00000612417 SERPINB9P50453 376 aa15.14■□□□□ 0.01
CDH1-213ENST00000612417 SCNN1GP51170 649 aa15.14■□□□□ 0.01
CDH1-213ENST00000612417 MRPL10Q7Z7H8 261 aaKnown RBP15.14■□□□□ 0.01
CDH1-213ENST00000612417 RNF217Q8TC41 542 aa15.14■□□□□ 0.01
CDH1-213ENST00000612417 NUDCD1Q96RS6 583 aa15.14■□□□□ 0.01
CDH1-213ENST00000612417 B3GNT5Q9BYG0 378 aa15.14■□□□□ 0.01
CDH1-213ENST00000612417 DNAI2Q9GZS0 605 aa15.14■□□□□ 0.01
CDH1-213ENST00000612417 DENND2DQ9H6A0 471 aaPredicted RBP15.14■□□□□ 0.01
CDH1-213ENST00000612417 ARL8BQ9NVJ2 186 aa15.14■□□□□ 0.01
CDH1-213ENST00000612417 MIOSQ9NXC5 875 aa15.14■□□□□ 0.01
CDH1-213ENST00000612417 KCNK4Q9NYG8 393 aa15.14■□□□□ 0.01
CDH1-213ENST00000612417 PHF24Q9UPV7 400 aa15.14■□□□□ 0.01
CDH1-213ENST00000612417 MYO18AQ92614 2054 aaKnown RBP15.14■□□□□ 0.01
CDH1-213ENST00000612417 HCRTO43612 131 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 CSH1P0DML2 217 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 CSH2P0DML3 217 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 TFE3P19532 575 aaPredicted RBP15.13■□□□□ 0.01
CDH1-213ENST00000612417 CNTFP26441 200 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 LRPAP1P30533 357 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 BCAT1P54687 386 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 GBE1Q04446 702 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 BST2Q10589 180 aaKnown RBP15.13■□□□□ 0.01
CDH1-213ENST00000612417 SLC10A2Q12908 348 aaPredicted RBP15.13■□□□□ 0.01
CDH1-213ENST00000612417 DSC3Q14574 896 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 CMPK2Q5EBM0 449 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 ATG16L1Q676U5 607 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 TIFABQ6ZNK6 161 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 C4orf50Q6ZRC1 276 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 SLC43A3Q8NBI5 491 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 GSTCDQ8NEC7 633 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 PGBD4Q96DM1 585 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 OXNAD1Q96HP4 312 aaPredicted RBP15.13■□□□□ 0.01
CDH1-213ENST00000612417 LPIN3Q9BQK8 851 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 CADM1Q9BY67 442 aaKnown RBP15.13■□□□□ 0.01
CDH1-213ENST00000612417 MMADHCQ9H3L0 296 aaPredicted RBP15.13■□□□□ 0.01
CDH1-213ENST00000612417 DPEP3Q9H4B8 488 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 AP4E1Q9UPM8 1137 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 INPP5FQ9Y2H2 1132 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 PCDHA11Q9Y5I1 949 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 A0A0U1RQF3 1178 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 I3L4J1 428 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 CYB561D2O14569 222 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 ZNF623O75123 536 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 MAP3K6O95382 1288 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 POMCP01189 267 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 MYL2P10916 166 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 LMO2P25791 158 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 CRHR1P34998 444 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 DBN1Q16643 649 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 TEX44Q53QW1 395 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 STEAP4Q687X5 459 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 KCNT2Q6UVM3 1135 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 ADGRF2Q8IZF7 708 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 CRYBG2Q8N1P7 616 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 ANKRD52Q8NB46 1076 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 KBTBD7Q8WVZ9 684 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 OLFM3Q96PB7 478 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 DEFB118Q96PH6 123 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 CSPG4P5Q96PW8 444 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 DHX35Q9H5Z1 703 aaKnown RBP15.13■□□□□ 0.01
CDH1-213ENST00000612417 DCLRE1BQ9H816 532 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 PRDM16Q9HAZ2 1276 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 FBXO6Q9NRD1 293 aaPredicted RBP15.13■□□□□ 0.01
CDH1-213ENST00000612417 RCOR3Q9P2K3 495 aaPredicted RBP15.13■□□□□ 0.01
CDH1-213ENST00000612417 LRRC42Q9Y546 428 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 USP3Q9Y6I4 520 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 SQORQ9Y6N5 450 aa15.13■□□□□ 0.01
CDH1-213ENST00000612417 TDRD15B5MCY1 1934 aaKnown RBP15.13■□□□□ 0.01
CDH1-213ENST00000612417 CCDC189A1A4V9 331 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 HMX2A2RU54 273 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 CASTOR2A6NHX0 329 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 HACD1B0YJ81 288 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 BIRC5O15392 142 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 SKIP12755 728 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 MLNP12872 115 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 ACADSBP45954 432 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 CLCNKBP51801 687 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 OCRLQ01968 901 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 ZBTB16Q05516 673 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 STRADAQ7RTN6 431 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.12■□□□□ 0.01
CDH1-213ENST00000612417 E2F7Q96AV8 911 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 KCTD15Q96SI1 283 aaPredicted RBP15.12■□□□□ 0.01
CDH1-213ENST00000612417 MOCS1Q9NZB8 636 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 ZNF638Q14966 1978 aaKnown RBP15.12■□□□□ 0.01
CDH1-213ENST00000612417 GSC2O15499 205 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 UGT1A9O60656 530 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 SNNO75324 88 aaPredicted RBP15.12■□□□□ 0.01
CDH1-213ENST00000612417 DGKIO75912 1065 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 ALDH1A2O94788 518 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 ATP5BP06576 529 aaKnown RBP15.12■□□□□ 0.01
CDH1-213ENST00000612417 BST1Q10588 318 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 STXBP5Q5T5C0 1151 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 NCBP2-AS2Q69YL0 99 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 HEATR6Q6AI08 1181 aaKnown RBP15.12■□□□□ 0.01
CDH1-213ENST00000612417 TRMT10BQ6PF06 316 aaKnown RBP15.12■□□□□ 0.01
CDH1-213ENST00000612417 TOP6BLQ8N6T0 577 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 CLEC4CQ8WTT0 213 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms