RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 CSPG4P5Q96PW8 444 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 NAP1L3Q99457 506 aaPredicted RBP11.51□□□□□ -0.57
CTCFL-214ENST00000608108 HEMGNQ9BXL5 484 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 MAK16Q9BXY0 300 aaKnown RBP11.51□□□□□ -0.57
CTCFL-214ENST00000608108 L2HGDHQ9H9P8 463 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 TDP1Q9NUW8 608 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 LSM7Q9UK45 103 aaKnown RBP11.51□□□□□ -0.57
CTCFL-214ENST00000608108 NUP205Q92621 2012 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 ZNF487B1APH4 448 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 E9PAM4 449 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 PDE2AO00408 941 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-214ENST00000608108 SCAMP3O14828 347 aaKnown RBP11.5□□□□□ -0.57
CTCFL-214ENST00000608108 ACSL4O60488 711 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 GREM1O60565 184 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 TJP3O95049 919 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 MTHFRP42898 656 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 MLLT6P55198 1093 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-214ENST00000608108 DYNLT1P63172 113 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 NRG1Q02297 640 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-214ENST00000608108 ADCY2Q08462 1091 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 AUHQ13825 339 aaKnown RBP11.5□□□□□ -0.57
CTCFL-214ENST00000608108 CCDC85BQ15834 202 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-214ENST00000608108 FAM133BQ5BKY9 247 aaKnown RBP11.5□□□□□ -0.57
CTCFL-214ENST00000608108 ACBD5Q5T8D3 534 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-214ENST00000608108 RAP1GAP2Q684P5 730 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 NADSYN1Q6IA69 706 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 CHSY1Q86X52 802 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 ARID3BQ8IVW6 561 aaPredicted RBP11.5□□□□□ -0.57
CTCFL-214ENST00000608108 PCDH19Q8TAB3 1148 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 SH3RF2Q8TEC5 729 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 AZIN2Q96A70 460 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 C1orf74Q96LT6 269 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 DCLK3Q9C098 648 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 GDE1Q9NZC3 331 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 CD207Q9UJ71 328 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 AGO1Q9UL18 857 aaKnown RBP11.5□□□□□ -0.57
CTCFL-214ENST00000608108 VANGL2Q9ULK5 521 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 MYOFQ9NZM1 2061 aa11.5□□□□□ -0.57
CTCFL-214ENST00000608108 GOLGA6L7A0A1B0GV03 622 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 TCRBV7S2A1N4TA0A589 114 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 F5H5T6 163 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 H3BQ06 376 aaPredicted RBP11.49□□□□□ -0.57
CTCFL-214ENST00000608108 APOL1O14791 398 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 DAPK3O43293 454 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 CST8O60676 142 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 LATS1O95835 1130 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 TACR2P21452 398 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 EPHB2P29323 1055 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 KLF1Q13351 362 aaPredicted RBP11.49□□□□□ -0.57
CTCFL-214ENST00000608108 DPYSQ14117 519 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 SKIV2LQ15477 1246 aaKnown RBP11.49□□□□□ -0.57
CTCFL-214ENST00000608108 ADGRF1Q5T601 910 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 MANEALQ5VSG8 457 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 RWDD4Q6NW29 188 aaKnown RBP11.49□□□□□ -0.57
CTCFL-214ENST00000608108 LRRC31Q6UY01 552 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 Q6ZNB5 142 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 BBS12Q6ZW61 710 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 C14orf80Q86SX3 495 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 PQLC3Q8N755 202 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 TBC1D31Q96DN5 1066 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 NECTIN4Q96NY8 510 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 RNF157Q96PX1 679 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 PRMT1Q99873 361 aaKnown RBP11.49□□□□□ -0.57
CTCFL-214ENST00000608108 ARHGEF4Q9NR80 690 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 STOML2Q9UJZ1 356 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 CDH7Q9ULB5 785 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 NEU3Q9UQ49 428 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 EFR3BQ9Y2G0 817 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 GOLGA6L10A0A0M3HER8 536 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 KRIT1O00522 736 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 KCNA5P22460 613 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 AMPD1P23109 780 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 WEE1P30291 646 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 HOXC13P31276 330 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 SLC6A4P31645 630 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 HTR7P34969 479 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 HCAR3P49019 387 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 USP4Q13107 963 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 TFDP2Q14188 446 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 ZNF77Q15935 545 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 FAM78AQ5JUQ0 283 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 SLC9A4Q6AI14 798 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 FBXL22Q6P050 247 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 RFWD3Q6PCD5 774 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 HTR3DQ70Z44 454 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 ZNF683Q8IZ20 524 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 CELF5Q8N6W0 485 aaKnown RBP11.49□□□□□ -0.57
CTCFL-214ENST00000608108 RIN3Q8TB24 985 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 MAIP1Q8WWC4 291 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 PPM1EQ8WY54 764 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 SMARCD2Q92925 531 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 ASB16Q96NS5 453 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 RPRD1AQ96P16 312 aaPredicted RBP11.49□□□□□ -0.57
CTCFL-214ENST00000608108 DDX50Q9BQ39 737 aaKnown RBP11.49□□□□□ -0.57
CTCFL-214ENST00000608108 AP1M1Q9BXS5 423 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 POMKQ9H5K3 350 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 KIF9Q9HAQ2 790 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 STIM2Q9P246 746 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 ZNF510Q9Y2H8 683 aa11.49□□□□□ -0.57
CTCFL-214ENST00000608108 USP15Q9Y4E8 981 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms