RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 STIM2Q9P246 746 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 USP18Q9UMW8 372 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 ZFHX2Q9C0A1 2572 aaPredicted RBP11.96□□□□□ -0.5
CCDC12-209ENST00000604164 ATG2BQ96BY7 2078 aa11.96□□□□□ -0.5
CCDC12-209ENST00000604164 SYNJ2BP-COX16A0A087WUM0 186 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 A0A1W2PQF6 199 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 H0Y626 953 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 EPN2O95208 641 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 LUC7L3O95232 432 aaKnown RBP11.95□□□□□ -0.5
CCDC12-209ENST00000604164 CALB1P05937 261 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 DLDP09622 509 aaKnown RBP11.95□□□□□ -0.5
CCDC12-209ENST00000604164 DESP17661 470 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 MMP8P22894 467 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 P2RY2P41231 377 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 WASP42768 502 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 SULT1E1P49888 294 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 ST8SIA6P61647 398 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 FMO1Q01740 532 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 DEUP1Q05D60 604 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 ZNF234Q14588 700 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 CSRP2Q16527 193 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 FNDC3BQ53EP0 1204 aaKnown RBP11.95□□□□□ -0.5
CCDC12-209ENST00000604164 RAP1GAP2Q684P5 730 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 CARNMT1Q8N4J0 409 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 DCLK2Q8N568 766 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 SLC20A1Q8WUM9 679 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 NT5C3BQ969T7 300 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 IQCDQ96DY2 449 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 PRICKLE1Q96MT3 831 aaPredicted RBP11.95□□□□□ -0.5
CCDC12-209ENST00000604164 ACOX2Q99424 681 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 NPY6RQ99463 290 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 EDEM3Q9BZQ6 932 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 ZDHHC4Q9NPG8 344 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 SEPT11Q9NVA2 429 aaKnown RBP11.95□□□□□ -0.5
CCDC12-209ENST00000604164 COX16Q9P0S2 106 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 SUN2Q9UH99 717 aa11.95□□□□□ -0.5
CCDC12-209ENST00000604164 A0A1B0GTH6 734 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 A0A1B0GVM2 712 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 ANKRD62A6NC57 917 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 TCAF2A6NFQ2 919 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 GOLGA8SH3BPF8 625 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 AP5Z1O43299 807 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 TPM3P06753 285 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 GABRG2P18507 467 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 CXCR3P49682 368 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 SGSHP51688 502 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 RPS24P62847 133 aaKnown RBP11.94□□□□□ -0.5
CCDC12-209ENST00000604164 CENPCQ03188 943 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 SULT2A1Q06520 285 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 SPEM2Q0P670 501 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 IQCB1Q15051 598 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 PMS2CLQ68D20 193 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 MBLAC2Q68D91 279 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 LRRC31Q6UY01 552 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 MMS22LQ6ZRQ5 1243 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 METTL3Q86U44 580 aaKnown RBP11.94□□□□□ -0.5
CCDC12-209ENST00000604164 ADIPOR2Q86V24 386 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 C12orf50Q8NA57 414 aaPredicted RBP11.94□□□□□ -0.5
CCDC12-209ENST00000604164 KDM1BQ8NB78 822 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 P2RY11Q96G91 374 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 RPRD1AQ96P16 312 aaPredicted RBP11.94□□□□□ -0.5
CCDC12-209ENST00000604164 AGPAT1Q99943 283 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 NUP58Q9BVL2 599 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 DUSP15Q9H1R2 295 aaPredicted RBP11.94□□□□□ -0.5
CCDC12-209ENST00000604164 CBX8Q9HC52 389 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 VPS45Q9NRW7 570 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 SEMA4GQ9NTN9 838 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 ADAM22Q9P0K1 906 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 CALCOCO1Q9P1Z2 691 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 HCN2Q9UL51 889 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 CLEC4EQ9ULY5 219 aa11.94□□□□□ -0.5
CCDC12-209ENST00000604164 PTPRZ1P23471 2315 aaPredicted RBP11.94□□□□□ -0.5
CCDC12-209ENST00000604164 FAM186AA6NE01 2351 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 ANTXRLA6NF34 631 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 NDUFS2O75306 463 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 EPHX1P07099 455 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 SRPRAP08240 638 aaKnown RBP11.93□□□□□ -0.5
CCDC12-209ENST00000604164 ZNF806P0C7X5 589 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 ACADMP11310 421 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 UNGP13051 313 aaPredicted RBP11.93□□□□□ -0.5
CCDC12-209ENST00000604164 CHRNB2P17787 502 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 NDUFV2P19404 249 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 HOXC13P31276 330 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 SDC4P31431 198 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 RDXP35241 583 aaKnown RBP11.93□□□□□ -0.5
CCDC12-209ENST00000604164 MPLP40238 635 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 NNMTP40261 264 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 IL12RB1P42701 662 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 GSCP56915 257 aaPredicted RBP11.93□□□□□ -0.5
CCDC12-209ENST00000604164 PITX1P78337 314 aaPredicted RBP11.93□□□□□ -0.5
CCDC12-209ENST00000604164 C1QBPQ07021 282 aaKnown RBP11.93□□□□□ -0.5
CCDC12-209ENST00000604164 SFSWAPQ12872 951 aaKnown RBP11.93□□□□□ -0.5
CCDC12-209ENST00000604164 LMAN2Q12907 356 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 AUHQ13825 339 aaKnown RBP11.93□□□□□ -0.5
CCDC12-209ENST00000604164 CLEC16AQ2KHT3 1053 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 ZSCAN23Q3MJ62 389 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 ARL13BQ3SXY8 428 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 FUT11Q495W5 492 aa11.93□□□□□ -0.5
CCDC12-209ENST00000604164 RNF219Q5W0B1 726 aaPredicted RBP11.93□□□□□ -0.5
CCDC12-209ENST00000604164 TMEM215Q68D42 235 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms