RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CHRM3P20309 590 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 ACAT1P24752 427 aaKnown RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 PRKAR1BP31321 381 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 VCPP55072 806 aaKnown RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 VSNL1P62760 191 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 FOXO1Q12778 655 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 ACVR2BQ13705 512 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 SCARF1Q14162 830 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 PDK1Q15118 436 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 PTGISQ16647 500 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 FAM187BQ17R55 369 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 INSCQ1MX18 579 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 CFAP221Q4G0U5 840 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 ATL3Q6DD88 541 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 ADGRA1Q86SQ6 560 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 RHOT2Q8IXI1 618 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 HACE1Q8IYU2 909 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 KIAA0319LQ8IZA0 1049 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 FBXW8Q8N3Y1 598 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 PRCCQ92733 491 aaPredicted RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 INPP5DQ92835 1189 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 SYTL4Q96C24 671 aaPredicted RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 ANKRD36BP1Q96IX9 119 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 NSMCE3Q96MG7 304 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 CEP44Q9C0F1 390 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 STN1Q9H668 368 aaKnown RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 C8orf33Q9H7E9 229 aaPredicted RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 TRPC7Q9HCX4 862 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 SAMSN1Q9NSI8 373 aaKnown RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 LRP2BPQ9P2M1 347 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 SCOCQ9UIL1 159 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 PIN4Q9Y237 131 aaKnown RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 NUMBLQ9Y6R0 609 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 IGSF1Q8N6C5 1336 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 RSPH10B2B2RC85 870 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 IGF2BP3O00425 579 aaKnown RBP eCLIP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 APOL1O14791 398 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 DNAJB6O75190 326 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 WFS1O76024 890 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 GNA14O95837 355 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 CFBP00751 764 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 URODP06132 367 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 CYP3A4P08684 503 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 SUPT20HL2P0C7V6 817 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 RSPH10BP0C881 870 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 COL6A2P12110 1019 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 DDX5P17844 614 aaKnown RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 LSP1P33241 339 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 SERPINB6P35237 376 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 ADRA1BP35368 520 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 ACAA2P42765 397 aaKnown RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 GBX2P52951 348 aaPredicted RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 TAP2Q03519 686 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 PRKCZQ05513 592 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 NR1D2Q14995 579 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 STK38Q15208 465 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 CAMK4Q16566 473 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 KYNUQ16719 465 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 NSMFQ6X4W1 530 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 ATG14Q6ZNE5 492 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 ZNF438Q7Z4V0 828 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 STK32CQ86UX6 486 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 SPATA24Q86W54 205 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 WDR49Q8IV35 697 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 TAGAPQ8N103 731 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 KRT78Q8N1N4 520 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 C1orf127Q8N9H9 656 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 OR10H5Q8NGA6 315 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 OR52K1Q8NGK4 314 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 HUS1BQ8NHY5 278 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 MYCBPAPQ8TBZ2 947 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 POC1BQ8TC44 478 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 STARD8Q92502 1023 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 PHKBQ93100 1093 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 ABTB1Q969K4 478 aaPredicted RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 GTPBP3Q969Y2 492 aaKnown RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 NSUN4Q96CB9 384 aaKnown RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 BTBD6Q96KE9 485 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 EGLN2Q96KS0 407 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 SPATA13Q96N96 652 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 AARSD1Q9BTE6 412 aaKnown RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 NUP85Q9BW27 656 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 GPR63Q9BZJ6 419 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 GSX2Q9BZM3 304 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 TMEM160Q9NX00 188 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 KLHL9Q9P2J3 617 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 MBD1Q9UIS9 605 aaPredicted RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 TMEM5Q9Y2B1 443 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 PCDHGA5Q9Y5G8 931 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 NR2E3Q9Y5X4 410 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 GPC6Q9Y625 555 aaPredicted RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 LMO7Q8WWI1 1683 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 MAP3K19Q56UN5 1328 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 ZSCAN5BA6NJL1 495 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 SCAMP1O15126 338 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CA12O43570 354 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 STRNO43815 780 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 MTX2O75431 263 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 GGPS1O95749 300 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 PLGP00747 810 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms