RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 CHST9Q7L1S5 443 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 TMEFF1Q8IYR6 380 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 CFAP52Q8N1V2 620 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 ZNF397Q8NF99 534 aaPredicted RBP12.6□□□□□ -0.39
LIG1-217ENST00000599165 CYB5D2Q8WUJ1 264 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 CIPCQ9C0C6 399 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 TMEM74BQ9NUR3 256 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 GGA2Q9UJY4 613 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 MED19A0JLT2 244 aaPredicted RBP12.59□□□□□ -0.39
LIG1-217ENST00000599165 LGALS16A8MUM7 142 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 PES1O00541 588 aaKnown RBP12.59□□□□□ -0.39
LIG1-217ENST00000599165 CAPN9O14815 690 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 SLC30A4O14863 429 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 TM4SF5O14894 197 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 TACR2P21452 398 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 KRT9P35527 623 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 POLR2FP61218 127 aaKnown RBP12.59□□□□□ -0.39
LIG1-217ENST00000599165 FMO1Q01740 532 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 SYCP1Q15431 976 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 EFHC1Q5JVL4 640 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 PEAR1Q5VY43 1037 aaPredicted RBP12.59□□□□□ -0.39
LIG1-217ENST00000599165 MBLAC2Q68D91 279 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 OR6B2Q6IFH4 312 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 ARMCX6Q7L4S7 300 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 BNIPLQ7Z465 357 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 C11orf74Q86VG3 221 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 XYLT1Q86Y38 959 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 SLC41A1Q8IVJ1 513 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 PGBD3Q8N328 593 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 ZNF366Q8N895 744 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 HJURPQ8NCD3 748 aaPredicted RBP12.59□□□□□ -0.39
LIG1-217ENST00000599165 FIBINQ8TAL6 211 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 NETO1Q8TDF5 533 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 WFIKKN2Q8TEU8 576 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 NT5C3BQ969T7 300 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 MRGPRX3Q96LB0 322 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 NPY6RQ99463 290 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 FUCA2Q9BTY2 467 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 TRIM62Q9BVG3 475 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 VPS45Q9NRW7 570 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 FAM207AQ9NSI2 230 aaPredicted RBP12.59□□□□□ -0.39
LIG1-217ENST00000599165 STIM2Q9P246 746 aa12.59□□□□□ -0.39
LIG1-217ENST00000599165 USP36Q9P275 1121 aaKnown RBP12.59□□□□□ -0.39
LIG1-217ENST00000599165 LNP1A1A4G5 178 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 DCDC2BA2VCK2 349 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 GOLGA6L22H0YM25 854 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 NPC1O15118 1278 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 GFPT2O94808 682 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 LUC7L3O95232 432 aaKnown RBP12.58□□□□□ -0.4
LIG1-217ENST00000599165 CAVIN2O95810 425 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 CYP1A1P04798 512 aaPredicted RBP12.58□□□□□ -0.4
LIG1-217ENST00000599165 FLT3P36888 993 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 GGCXP38435 758 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 DHPSP49366 369 aaPredicted RBP12.58□□□□□ -0.4
LIG1-217ENST00000599165 LIMK1P53667 647 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 BPIFB4P59827 614 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 CAMK2GQ13555 558 aaPredicted RBP12.58□□□□□ -0.4
LIG1-217ENST00000599165 SDE2Q6IQ49 451 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 ERMP1Q7Z2K6 904 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 METTL3Q86U44 580 aaKnown RBP12.58□□□□□ -0.4
LIG1-217ENST00000599165 CIR1Q86X95 450 aaPredicted RBP12.58□□□□□ -0.4
LIG1-217ENST00000599165 MFN1Q8IWA4 741 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 DHX40Q8IX18 779 aaKnown RBP12.58□□□□□ -0.4
LIG1-217ENST00000599165 LGI2Q8N0V4 545 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 AHI1Q8N157 1196 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 DEFB119Q8N690 84 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 AOPEPQ8N6M6 819 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 TMEM35BQ8NCS4 154 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 KNL1Q8NG31 2342 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 OR52K2Q8NGK3 314 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 IGSF8Q969P0 613 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 TTC17Q96AE7 1141 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 BTN2A3PQ96KV6 586 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 PCDHB18PQ96TA0 734 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 MTG2Q9H4K7 406 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 FAM204AQ9H8W3 233 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 NLRC4Q9NPP4 1024 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 PIGVQ9NUD9 493 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 DDIT4Q9NX09 232 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 TMEM59LQ9UK28 342 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 CDV3Q9UKY7 258 aaKnown RBP12.58□□□□□ -0.4
LIG1-217ENST00000599165 CYP8B1Q9UNU6 501 aa12.58□□□□□ -0.4
LIG1-217ENST00000599165 ATXN2Q99700 1313 aaKnown RBP12.58□□□□□ -0.4
LIG1-217ENST00000599165 SYNJ2BP-COX16A0A087WUM0 186 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 TIMM44O43615 452 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 LSM8O95777 96 aaKnown RBP12.57□□□□□ -0.4
LIG1-217ENST00000599165 IGLV3-19P01714 112 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 APOEP02649 317 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 DLDP09622 509 aaKnown RBP12.57□□□□□ -0.4
LIG1-217ENST00000599165 ITPKAP23677 461 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 NOS2P35228 1153 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 SOX5P35711 763 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 SCNN1AP37088 669 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 CSKP41240 450 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 MATKP42679 507 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 CTSOP43234 321 aaPredicted RBP12.57□□□□□ -0.4
LIG1-217ENST00000599165 CDK17Q00537 523 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 CENPCQ03188 943 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 PTP4A2Q12974 167 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 ANO6Q4KMQ2 910 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms