RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 FSCBQ5H9T9 825 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 TMEM196Q5HYL7 178 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 TMEM215Q68D42 235 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 CWF19L1Q69YN2 538 aaKnown RBP10.94□□□□□ -0.66
LIG1-210ENST00000596332 FSTL4Q6MZW2 842 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 CC2D1AQ6P1N0 951 aaPredicted RBP10.94□□□□□ -0.66
LIG1-210ENST00000596332 ZNF662Q6ZS27 426 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 ANKS1BQ7Z6G8 1248 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 CFAP52Q8N1V2 620 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 ATP6V0D2Q8N8Y2 350 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 LRRC57Q8N9N7 239 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 TPCN2Q8NHX9 752 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 FAM71BQ8TC56 605 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 CD101Q93033 1021 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 ALG14Q96F25 216 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 GOLPH3Q9H4A6 298 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 GPATCH2LQ9NWQ4 482 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 DLGAP2Q9P1A6 1054 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 IP6K2Q9UHH9 426 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 CA14Q9ULX7 337 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 PIAS3Q9Y6X2 628 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 K7EQS6 105 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 MYO1FO00160 1098 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 BUB1BO60566 1050 aaPredicted RBP10.93□□□□□ -0.66
LIG1-210ENST00000596332 TULP3O75386 442 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 APOEP02649 317 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 RARAP10276 462 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 TYRP14679 529 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 TARSP26639 723 aaKnown RBP10.93□□□□□ -0.66
LIG1-210ENST00000596332 HOXC13P31276 330 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 L1CAMP32004 1257 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 SLC11A2P49281 568 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 PFKPQ01813 784 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 PRKCQQ04759 706 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 GAD2Q05329 585 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 MPP7Q5T2T1 576 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 CXorf57Q6NSI4 855 aaKnown RBP10.93□□□□□ -0.66
LIG1-210ENST00000596332 SLFN11Q7Z7L1 901 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 NLRP14Q86W24 1093 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 RALGPS2Q86X27 583 aaPredicted RBP10.93□□□□□ -0.66
LIG1-210ENST00000596332 REXO1L1PQ8IX06 675 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 RHOT2Q8IXI1 618 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 LGI2Q8N0V4 545 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 SIX5Q8N196 739 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 CPA6Q8N4T0 437 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 NAT16Q8N8M0 369 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 CCDC112Q8NEF3 446 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 TSC1Q92574 1164 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 TMA16Q96EY4 203 aaKnown RBP10.93□□□□□ -0.66
LIG1-210ENST00000596332 KCTD15Q96SI1 283 aaPredicted RBP10.93□□□□□ -0.66
LIG1-210ENST00000596332 SNRNP25Q9BV90 132 aaKnown RBP10.93□□□□□ -0.66
LIG1-210ENST00000596332 IRX2Q9BZI1 471 aaPredicted RBP10.93□□□□□ -0.66
LIG1-210ENST00000596332 KLC2Q9H0B6 622 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 SIK2Q9H0K1 926 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 C8orf33Q9H7E9 229 aaPredicted RBP10.93□□□□□ -0.66
LIG1-210ENST00000596332 ARHGEF3Q9NR81 526 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 NDFIP2Q9NV92 336 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 TMEM51Q9NW97 253 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 OR12D3Q9UGF7 316 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 PCSK1NQ9UHG2 260 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 INTS6Q9UL03 887 aaKnown RBP10.93□□□□□ -0.66
LIG1-210ENST00000596332 USP18Q9UMW8 372 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 HYOU1Q9Y4L1 999 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 OR51B4Q9Y5P0 310 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 ALG6Q9Y672 507 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 F5P12259 2224 aa10.93□□□□□ -0.66
LIG1-210ENST00000596332 C3orf70A6NLC5 250 aaPredicted RBP10.92□□□□□ -0.66
LIG1-210ENST00000596332 PRRT4C9JH25 899 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 NEDD8-MDP1E9PL57 170 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 BUB1O43683 1085 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 LRIG2O94898 1065 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 CHRNB1P11230 501 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 HLA-FP30511 346 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 MAN1A1P33908 653 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 KRT83P78385 493 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 CCINQ13939 588 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 GAS6Q14393 721 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 MESDQ14696 234 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 SPA17Q15506 151 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 MPPE1Q53F39 396 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 KCNT1Q5JUK3 1230 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 ERMARDQ5T6L9 678 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 SCYL2Q6P3W7 929 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 TPRG1Q6ZUI0 275 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 BMP8AQ7Z5Y6 402 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 CIR1Q86X95 450 aaPredicted RBP10.92□□□□□ -0.66
LIG1-210ENST00000596332 CSGALNACT1Q8TDX6 532 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 BHMTQ93088 406 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 RNF34Q969K3 372 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 BBS2Q9BXC9 721 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 FOXQ1Q9C009 403 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 NOL6Q9H6R4 1146 aaKnown RBP10.92□□□□□ -0.66
LIG1-210ENST00000596332 LTB4R2Q9NPC1 389 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 MPP6Q9NZW5 540 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 VANGL2Q9ULK5 521 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 SLC27A6Q9Y2P4 619 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 PAXBP1Q9Y5B6 917 aa10.92□□□□□ -0.66
LIG1-210ENST00000596332 KANSL1LA0AUZ9 987 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 GRID2IPA4D2P6 1211 aa10.91□□□□□ -0.66
LIG1-210ENST00000596332 TMEM221A6NGB7 291 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms