RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PABPC1P11940 636 aaKnown RBP13.52□□□□□ -0.25
USE1-207ENST00000596136 NDUFV2P19404 249 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 SDHBP21912 280 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 CCR1P32246 355 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 STAT1P42224 750 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 RPS24P62847 133 aaKnown RBP13.52□□□□□ -0.25
USE1-207ENST00000596136 FMO1Q01740 532 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 CDR2Q01850 454 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 OTUD1Q5VV17 481 aaPredicted RBP13.52□□□□□ -0.25
USE1-207ENST00000596136 PRR23CQ6ZRP0 262 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 CHST9Q7L1S5 443 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 AHI1Q8N157 1196 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 NEK11Q8NG66 645 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 SLC20A1Q8WUM9 679 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 RLN3Q8WXF3 142 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 TTC17Q96AE7 1141 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 RMDN1Q96DB5 314 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 MRGPRX1Q96LB2 322 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 SPAG5Q96R06 1193 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 ADAM33Q9BZ11 813 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 TMEM245Q9H330 911 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 SYNCQ9H7C4 482 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 ABCB8Q9NUT2 735 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 DDIT4Q9NX09 232 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 CALCOCO1Q9P1Z2 691 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 BCCIPQ9P287 314 aaKnown RBP eCLIP13.52□□□□□ -0.25
USE1-207ENST00000596136 SLC12A6Q9UHW9 1150 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 TMEM59LQ9UK28 342 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 USP18Q9UMW8 372 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 INVSQ9Y283 1065 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 RAD54BQ9Y620 910 aa13.52□□□□□ -0.25
USE1-207ENST00000596136 MUC22E2RYF6 1773 aaPredicted RBP13.51□□□□□ -0.25
USE1-207ENST00000596136 TYW5A2RUC4 315 aaKnown RBP13.51□□□□□ -0.25
USE1-207ENST00000596136 ZBTB24O43167 697 aaPredicted RBP13.51□□□□□ -0.25
USE1-207ENST00000596136 ZNF217O75362 1048 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 MOCS2O96007 188 aaPredicted RBP13.51□□□□□ -0.25
USE1-207ENST00000596136 DLDP09622 509 aaKnown RBP13.51□□□□□ -0.25
USE1-207ENST00000596136 ABCB4P21439 1286 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 TACR2P21452 398 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 MMP8P22894 467 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 CD70P32970 193 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 CXCR3P49682 368 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 ZNF165P49910 485 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 STARD3Q14849 445 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 IQCB1Q15051 598 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 PTPRNQ16849 979 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 FUT11Q495W5 492 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 C5orf22Q49AR2 442 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 MBLAC2Q68D91 279 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 TRIM72Q6ZMU5 477 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 BNIPLQ7Z465 357 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 MFN1Q8IWA4 741 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 PGBD3Q8N328 593 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 FRMD1Q8N878 549 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 MSANTD4Q8NCY6 345 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 CPA5Q8WXQ8 436 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 SORCS1Q8WY21 1168 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 SPACA7Q96KW9 195 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 CIPCQ9C0C6 399 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 FAM204AQ9H8W3 233 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 RTN4Q9NQC3 1192 aaKnown RBP13.51□□□□□ -0.25
USE1-207ENST00000596136 VPS45Q9NRW7 570 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.51□□□□□ -0.25
USE1-207ENST00000596136 INTS6Q9UL03 887 aaKnown RBP13.51□□□□□ -0.25
USE1-207ENST00000596136 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.51□□□□□ -0.25
USE1-207ENST00000596136 PI4KAP42356 2102 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 CEP192Q8TEP8 1941 aa13.51□□□□□ -0.25
USE1-207ENST00000596136 TNRC6BQ9UPQ9 1833 aaKnown RBP13.5□□□□□ -0.25
USE1-207ENST00000596136 IGHV1OR15-9A0A0B4J2B8 117 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 M0QYT0 321 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 TEX33O43247 280 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 LUC7L3O95232 432 aaKnown RBP13.5□□□□□ -0.25
USE1-207ENST00000596136 F9P00740 461 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 ATP5BP06576 529 aaKnown RBP13.5□□□□□ -0.25
USE1-207ENST00000596136 UNGP13051 313 aaPredicted RBP13.5□□□□□ -0.25
USE1-207ENST00000596136 PRKCHP24723 683 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 MPLP40238 635 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 COPAP53621 1224 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 LMAN2Q12907 356 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 CAMK2GQ13555 558 aaPredicted RBP13.5□□□□□ -0.25
USE1-207ENST00000596136 PUM1Q14671 1186 aaKnown RBP eCLIP13.5□□□□□ -0.25
USE1-207ENST00000596136 RSPO4Q2I0M5 234 aaPredicted RBP13.5□□□□□ -0.25
USE1-207ENST00000596136 SLC25A52Q3SY17 297 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 FSCBQ5H9T9 825 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 BRMS1LQ5PSV4 323 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 TTC39BQ5VTQ0 682 aaPredicted RBP13.5□□□□□ -0.25
USE1-207ENST00000596136 NAA35Q5VZE5 725 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 RAP1GAP2Q684P5 730 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 SLC36A4Q6YBV0 504 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 CHSY1Q86X52 802 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 LGI2Q8N0V4 545 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 CFAP52Q8N1V2 620 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 KDM1BQ8NB78 822 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 MKRN2Q9H000 416 aaKnown RBP13.5□□□□□ -0.25
USE1-207ENST00000596136 PIGVQ9NUD9 493 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 ARHGEF38Q9NXL2 777 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 STIM2Q9P246 746 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 STAP1Q9ULZ2 295 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 PLA2G4CQ9UP65 541 aa13.5□□□□□ -0.25
USE1-207ENST00000596136 F5H5T6 163 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms