RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 SIK2Q9H0K1 926 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 ISCUQ9H1K1 167 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 WDCPQ9H6R7 721 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 PRMT8Q9NR22 394 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 FAM86C1Q9NVL1 165 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 CNOT8Q9UFF9 292 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 VANGL2Q9ULK5 521 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 NENFQ9UMX5 172 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 CKAP5Q14008 2032 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 F5H5T6 163 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 ENDOD1O94919 500 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 KLF8O95600 359 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 F9P00740 461 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 HLA-FP30511 346 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 TNFRSF4P43489 277 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 NUMBP49757 651 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 HDAC4P56524 1084 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 CSTF1Q05048 431 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 DMWDQ09019 674 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 ZNF252P-AS1Q0IIN9 211 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 AUHQ13825 339 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 BRMS1LQ5PSV4 323 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 EGFLAMQ63HQ2 1017 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 PPP1R2P3Q6NXS1 205 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 FBXL22Q6P050 247 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 DCUN1D2Q6PH85 259 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 VPS36Q86VN1 386 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 CARNMT1Q8N4J0 409 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 CCDC185Q8N715 623 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 TC2NQ8N9U0 490 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 IGSF8Q969P0 613 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 MRFAP1L1Q96HT8 127 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 ACOX2Q99424 681 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 MAGEB5Q9BZ81 275 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 SLC12A6Q9UHW9 1150 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 MUC6Q6W4X9 2439 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 WDFY4Q6ZS81 3184 aa14.26□□□□□ -0.13
SHKBP1-207ENST00000595631 CHURC1-FNTBB4DL54 471 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 AKR1B15C9JRZ8 316 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 SP9P0CG40 484 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 TDGF1P13385 188 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 HNRNPLP14866 589 aaKnown RBP eCLIP14.25□□□□□ -0.131e-11■■■■□ 20.2
SHKBP1-207ENST00000595631 CD70P32970 193 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 WASP42768 502 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 CXCL12P48061 93 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 CCR3P51677 355 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 ZNF143P52747 638 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 MAPK8IP2Q13387 824 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 ASTE1Q2TB18 679 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 FSCBQ5H9T9 825 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 CCDC122Q5T0U0 273 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 TMEM215Q68D42 235 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 RNF43Q68DV7 783 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 ALKBH5Q6P6C2 394 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 STRADAQ7RTN6 431 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 ANKS1BQ7Z6G8 1248 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 MFN1Q8IWA4 741 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 DRC7Q8IY82 874 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 IL17RCQ8NAC3 791 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 TXNDC5Q8NBS9 432 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 SORCS1Q8WY21 1168 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 CENPIQ92674 756 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 ARHGEF26Q96DR7 871 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 ERLEC1Q96DZ1 483 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 HHIPQ96QV1 700 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 PRRX2Q99811 253 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 IER2Q9BTL4 223 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 PACSIN1Q9BY11 444 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 SLC2A11Q9BYW1 496 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 THAP2Q9H0W7 228 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 ABCB8Q9NUT2 735 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 PARVAQ9NVD7 372 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 SLC27A6Q9Y2P4 619 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 CHD5Q8TDI0 1954 aa14.25□□□□□ -0.13
SHKBP1-207ENST00000595631 CEP192Q8TEP8 1941 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 ANKRD62A6NC57 917 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 K7ESF4 209 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 SGK1O00141 431 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 ADAM23O75077 832 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 LUC7L3O95232 432 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 PXNP49023 591 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 GALCP54803 685 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 PTPN5P54829 565 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 MRPS21P82921 87 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 LMAN2Q12907 356 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 DMC1Q14565 340 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 TSR1Q2NL82 804 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 ARTNQ5T4W7 220 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 HEATR6Q6AI08 1181 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 MAMSTRQ6ZN01 415 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 CHST9Q7L1S5 443 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 CNGA4Q8IV77 575 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 ZNF683Q8IZ20 524 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 ZNF513Q8N8E2 541 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 LMLNQ96KR4 655 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 RPRD1AQ96P16 312 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 CNPY3Q9BT09 278 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 KCNH6Q9H252 994 aa14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 NHEJ1Q9H9Q4 299 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-207ENST00000595631 SPTLC3Q9NUV7 552 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms