RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 FAM47DPA6NHR8 397 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 POC1B-GALNT4F8VUJ3 575 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 CCDC22O60826 627 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 CDH16O75309 829 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 ZWINTO95229 277 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 PSMG1O95456 288 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 CCDC166P0CW27 439 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 STIP1P31948 543 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 MATKP42679 507 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 SULT1E1P49888 294 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 SLC18A1P54219 525 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 PITX1P78337 314 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 LIN52Q52LA3 116 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 SIX6OS1Q8N1H7 587 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 PYROXD2Q8N2H3 581 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 C10orf82Q8WW14 230 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 TTC25Q96NG3 672 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 ZNF670Q9BS34 389 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 INPP5FQ9Y2H2 1132 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 GIT1Q9Y2X7 761 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 CAPN9O14815 690 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 ALOX15BO15296 676 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 ALDH1A1P00352 501 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 FAM200BP0CF97 657 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 RBL1P28749 1068 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 SCNN1BP51168 640 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 TKTL1P51854 596 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 TMED2Q15363 201 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 SLC9A4Q6AI14 798 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 HASPINQ8TF76 798 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 KCNK16Q96T55 309 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 NRDE2Q9H7Z3 1164 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 ZNF510Q9Y2H8 683 aa17.59■□□□□ 0.41
SHKBP1-205ENST00000594973 NDC80O14777 642 aa17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 EDF1O60869 148 aaKnown RBP17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 CBX6O95503 412 aa17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 ASMTLO95671 621 aa17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 ABHD2P08910 425 aa17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 TGM2P21980 687 aa17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 SCNN1AP37088 669 aa17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 ARL4CP56559 192 aa17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 YWHAZP63104 245 aaKnown RBP17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 MRPS5P82675 430 aaKnown RBP17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 GBE1Q04446 702 aa17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 DPYSL2Q16555 572 aa17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 SRRM1Q8IYB3 904 aaKnown RBP17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 RIBC1Q8N443 379 aaPredicted RBP17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 KLHDC9Q8NEP7 349 aa17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 PYROXD1Q8WU10 500 aa17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 PPP1R14BQ96C90 147 aa17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 PCED1BQ96HM7 432 aa17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 KCTD15Q96SI1 283 aaPredicted RBP17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 USP29Q9HBJ7 922 aa17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 UBN1Q9NPG3 1134 aa17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 TMPRSS4Q9NRS4 437 aa17.58■□□□□ 0.41
SHKBP1-205ENST00000594973 C2CD2LO14523 706 aa17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 PIAS1O75925 651 aa17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 B3GAT3O94766 335 aa17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 ZBED1O96006 694 aa17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 CDK7P50613 346 aa17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 WDR4P57081 412 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 NR1H3Q13133 447 aa17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 NME3Q13232 169 aa17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 LPIN1Q14693 890 aa17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 UPP1Q16831 310 aa17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 BBS9Q3SYG4 887 aa17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 TIGD5Q53EQ6 642 aa17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 CCSAPQ6IQ19 270 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 HFE2Q6ZVN8 426 aa17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 ARCQ7LC44 396 aa17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 ADAM2Q99965 735 aa17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 CADM1Q9BY67 442 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 MTMR10Q9NXD2 777 aa17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 ZFP69BQ9UJL9 534 aa17.58■□□□□ 0.4
SHKBP1-205ENST00000594973 TBX10O75333 385 aa17.57■□□□□ 0.4
SHKBP1-205ENST00000594973 GOT1P17174 413 aa17.57■□□□□ 0.4
SHKBP1-205ENST00000594973 LHX1P48742 406 aa17.57■□□□□ 0.4
SHKBP1-205ENST00000594973 SP3Q02447 781 aa17.57■□□□□ 0.4
SHKBP1-205ENST00000594973 SLC25A52Q3SY17 297 aa17.57■□□□□ 0.4
SHKBP1-205ENST00000594973 TAF1BQ53T94 588 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-205ENST00000594973 ACSBG2Q5FVE4 666 aa17.57■□□□□ 0.4
SHKBP1-205ENST00000594973 FAXCQ5TGI0 409 aa17.57■□□□□ 0.4
SHKBP1-205ENST00000594973 SYPL2Q5VXT5 272 aa17.57■□□□□ 0.4
SHKBP1-205ENST00000594973 CTU1Q7Z7A3 348 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-205ENST00000594973 MIPEPQ99797 713 aa17.57■□□□□ 0.4
SHKBP1-205ENST00000594973 BTBD10Q9BSF8 475 aa17.57■□□□□ 0.4
SHKBP1-205ENST00000594973 RHOBTB2Q9BYZ6 727 aa17.57■□□□□ 0.4
SHKBP1-205ENST00000594973 RAB6BQ9NRW1 208 aa17.57■□□□□ 0.4
SHKBP1-205ENST00000594973 TMEM30AQ9NV96 361 aa17.57■□□□□ 0.4
SHKBP1-205ENST00000594973 KRT36O76013 467 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 TMCC1O94876 653 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 GCAP28676 217 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 SSTR1P30872 391 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 GPX6P59796 221 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 ITGA7Q13683 1181 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 MAP7Q14244 749 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 RFWD3Q6PCD5 774 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 FAM35AQ86V20 835 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 PDIK1LQ8N165 341 aa17.56■□□□□ 0.4
SHKBP1-205ENST00000594973 TMEM86AQ8N2M4 240 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms