RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 FIBINQ8TAL6 211 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 ERGIC2Q96RQ1 377 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 PPP1R9BQ96SB3 815 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 VPS45Q9NRW7 570 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 HCN2Q9UL51 889 aa17.98■□□□□ 0.47
IRF3-208ENST00000594387 A0A1W2PQF6 199 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 WASH3PC4AMC7 463 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 AP5Z1O43299 807 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 NDUFS2O75306 463 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 IGLV3-25P01717 112 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 ZNF806P0C7X5 589 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 CHRM1P11229 460 aaPredicted RBP17.97■□□□□ 0.47
IRF3-208ENST00000594387 ACADMP11310 421 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 ZNF18P17022 549 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 SCNN1AP37088 669 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 MPLP40238 635 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 IL12RB1P42701 662 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 GABRB2P47870 512 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 NCAPHQ15003 741 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 RSPO4Q2I0M5 234 aaPredicted RBP17.97■□□□□ 0.47
IRF3-208ENST00000594387 KLHL40Q2TBA0 621 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 AASDHQ4L235 1098 aaPredicted RBP17.97■□□□□ 0.47
IRF3-208ENST00000594387 SPDYCQ5MJ68 293 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 NAA35Q5VZE5 725 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 PMS2CLQ68D20 193 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 MBLAC2Q68D91 279 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 CYP2U1Q7Z449 544 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 EPS8L1Q8TE68 723 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 CPA5Q8WXQ8 436 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 ERLEC1Q96DZ1 483 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 NUCKS1Q9H1E3 243 aaKnown RBP17.97■□□□□ 0.47
IRF3-208ENST00000594387 PRDM16Q9HAZ2 1276 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 PARD6AQ9NPB6 346 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 CALCOCO1Q9P1Z2 691 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 KIAA1522Q9P206 1035 aaPredicted RBP17.97■□□□□ 0.47
IRF3-208ENST00000594387 SUN2Q9UH99 717 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 SIK3Q9Y2K2 1263 aa17.97■□□□□ 0.47
IRF3-208ENST00000594387 GOLGA8SH3BPF8 625 aa17.96■□□□□ 0.47
IRF3-208ENST00000594387 LUC7L3O95232 432 aaKnown RBP17.96■□□□□ 0.47
IRF3-208ENST00000594387 CAVIN2O95810 425 aa17.96■□□□□ 0.47
IRF3-208ENST00000594387 NDUFV2P19404 249 aa17.96■□□□□ 0.47
IRF3-208ENST00000594387 SULT1E1P49888 294 aa17.96■□□□□ 0.47
IRF3-208ENST00000594387 SGSHP51688 502 aa17.96■□□□□ 0.47
IRF3-208ENST00000594387 OXCT1P55809 520 aa17.96■□□□□ 0.47
IRF3-208ENST00000594387 JAM2P57087 298 aa17.96■□□□□ 0.47
IRF3-208ENST00000594387 RPS24P62847 133 aaKnown RBP17.96■□□□□ 0.47
IRF3-208ENST00000594387 RPL6Q02878 288 aaKnown RBP17.96■□□□□ 0.47
IRF3-208ENST00000594387 TTC39BQ5VTQ0 682 aaPredicted RBP17.96■□□□□ 0.47
IRF3-208ENST00000594387 KIAA1211LQ6NV74 962 aa17.96■□□□□ 0.47
IRF3-208ENST00000594387 CFAP52Q8N1V2 620 aa17.96■□□□□ 0.47
IRF3-208ENST00000594387 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.96■□□□□ 0.47
IRF3-208ENST00000594387 DDX1Q92499 740 aaKnown RBP17.96■□□□□ 0.47
IRF3-208ENST00000594387 P2RY11Q96G91 374 aa17.96■□□□□ 0.47
IRF3-208ENST00000594387 WDCPQ9H6R7 721 aa17.96■□□□□ 0.47
IRF3-208ENST00000594387 SEPT11Q9NVA2 429 aaKnown RBP17.96■□□□□ 0.47
IRF3-208ENST00000594387 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.96■□□□□ 0.47
IRF3-208ENST00000594387 PI4KAP42356 2102 aa17.96■□□□□ 0.47
IRF3-208ENST00000594387 ASLP04424 464 aa17.95■□□□□ 0.46
IRF3-208ENST00000594387 DLDP09622 509 aaKnown RBP17.95■□□□□ 0.46
IRF3-208ENST00000594387 BCKDHBP21953 392 aa17.95■□□□□ 0.46
IRF3-208ENST00000594387 NSFP46459 744 aaKnown RBP17.95■□□□□ 0.46
IRF3-208ENST00000594387 NOMO3P69849 1222 aa17.95■□□□□ 0.46
IRF3-208ENST00000594387 DEUP1Q05D60 604 aa17.95■□□□□ 0.46
IRF3-208ENST00000594387 MAP7D1Q3KQU3 841 aa17.95■□□□□ 0.46
IRF3-208ENST00000594387 RNF219Q5W0B1 726 aaPredicted RBP17.95■□□□□ 0.46
IRF3-208ENST00000594387 XYLT1Q86Y38 959 aa17.95■□□□□ 0.46
IRF3-208ENST00000594387 NETO1Q8TDF5 533 aa17.95■□□□□ 0.46
IRF3-208ENST00000594387 SORCS1Q8WY21 1168 aa17.95■□□□□ 0.46
IRF3-208ENST00000594387 PRCCQ92733 491 aaPredicted RBP17.95■□□□□ 0.46
IRF3-208ENST00000594387 MRGPRX1Q96LB2 322 aa17.95■□□□□ 0.46
IRF3-208ENST00000594387 CYP8B1Q9UNU6 501 aa17.95■□□□□ 0.46
IRF3-208ENST00000594387 TNRC6BQ9UPQ9 1833 aaKnown RBP17.95■□□□□ 0.46
IRF3-208ENST00000594387 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.94■□□□□ 0.46
IRF3-208ENST00000594387 BCLAF3A2AJT9 711 aaKnown RBP17.94■□□□□ 0.46
IRF3-208ENST00000594387 SERPINC1P01008 464 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 ATP1A3P13637 1013 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 TGM1P22735 817 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 CD70P32970 193 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 NNMTP40261 264 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 PITX1P78337 314 aaPredicted RBP17.94■□□□□ 0.46
IRF3-208ENST00000594387 SLC12A1Q13621 1099 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 ENPP2Q13822 863 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 CCDC6Q16204 474 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 SKOR2Q2VWA4 1001 aaPredicted RBP17.94■□□□□ 0.46
IRF3-208ENST00000594387 FUT11Q495W5 492 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 BRMS1LQ5PSV4 323 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 ACBD5Q5T8D3 534 aaPredicted RBP17.94■□□□□ 0.46
IRF3-208ENST00000594387 TMEM215Q68D42 235 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 LRSAM1Q6UWE0 723 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 LRRC31Q6UY01 552 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 KIAA0907Q7Z7F0 614 aaPredicted RBP17.94■□□□□ 0.46
IRF3-208ENST00000594387 ADIPOR2Q86V24 386 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 TMPRSS6Q8IU80 811 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 TMEFF1Q8IYR6 380 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 CYB5D2Q8WUJ1 264 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 SLC20A1Q8WUM9 679 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 PIGKQ92643 395 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 RMDN1Q96DB5 314 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 SIPA1Q96FS4 1042 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms