RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 SLC12A6Q9UHW9 1150 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 SHROOM3Q8TF72 1996 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 CDH23Q9H251 3354 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 MYO9BQ13459 2157 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 BCLAF3A2AJT9 711 aaKnown RBP21.45■■□□□ 1.02
PNKP-203ENST00000593946 SEC31AO94979 1220 aaKnown RBP21.45■■□□□ 1.02
PNKP-203ENST00000593946 HMBSP08397 361 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 GDF10P55107 478 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 RAB30Q15771 203 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 MS4A13Q5J8X5 152 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 PPM1LQ5SGD2 360 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 GAREM2Q75VX8 874 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 UNC45BQ8IWX7 931 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 SLC22A17Q8WUG5 538 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 TBC1D31Q96DN5 1066 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 RNF38Q9H0F5 515 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 NEUROG2Q9H2A3 272 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 NKX2-4Q9H2Z4 354 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 MAN1C1Q9NR34 630 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 MSRAQ9UJ68 235 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 NOTCH4Q99466 2003 aa21.45■■□□□ 1.02
PNKP-203ENST00000593946 HELZP42694 1942 aaKnown RBP21.45■■□□□ 1.02
PNKP-203ENST00000593946 E9PAM4 449 aa21.44■■□□□ 1.02
PNKP-203ENST00000593946 H0YGN5 161 aa21.44■■□□□ 1.02
PNKP-203ENST00000593946 SRGAP2BP0DMP2 458 aa21.44■■□□□ 1.02
PNKP-203ENST00000593946 STIP1P31948 543 aaKnown RBP21.44■■□□□ 1.02
PNKP-203ENST00000593946 KCNQ1P51787 676 aa21.44■■□□□ 1.02
PNKP-203ENST00000593946 COG7P83436 770 aa21.44■■□□□ 1.02
PNKP-203ENST00000593946 ACBD5Q5T8D3 534 aaPredicted RBP21.44■■□□□ 1.02
PNKP-203ENST00000593946 EMBQ6PCB8 327 aa21.44■■□□□ 1.02
PNKP-203ENST00000593946 PRUNE1Q86TP1 453 aa21.44■■□□□ 1.02
PNKP-203ENST00000593946 ZNF683Q8IZ20 524 aa21.44■■□□□ 1.02
PNKP-203ENST00000593946 RSAD2Q8WXG1 361 aa21.44■■□□□ 1.02
PNKP-203ENST00000593946 QKIQ96PU8 341 aaKnown RBP eCLIP21.44■■□□□ 1.02
PNKP-203ENST00000593946 CERS4Q9HA82 394 aa21.44■■□□□ 1.02
PNKP-203ENST00000593946 USP29Q9HBJ7 922 aa21.44■■□□□ 1.02
PNKP-203ENST00000593946 ZDHHC18Q9NUE0 388 aa21.44■■□□□ 1.02
PNKP-203ENST00000593946 ZNF446Q9NWS9 450 aa21.44■■□□□ 1.02
PNKP-203ENST00000593946 WHRNQ9P202 907 aa21.44■■□□□ 1.02
PNKP-203ENST00000593946 RAD54BQ9Y620 910 aa21.44■■□□□ 1.02
PNKP-203ENST00000593946 CFAP69A5D8W1 941 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 CCL16O15467 120 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 FGF10O15520 208 aaPredicted RBP21.43■■□□□ 1.02
PNKP-203ENST00000593946 ETS1P14921 441 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 EPCAMP16422 314 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 GABRR2P28476 465 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 HOXA9P31269 272 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 SLC45A4Q5BKX6 768 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 PPP2R2DQ66LE6 453 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 RWDD4Q6NW29 188 aaKnown RBP21.43■■□□□ 1.02
PNKP-203ENST00000593946 ZDHHC24Q6UX98 284 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 B4GALNT4Q76KP1 1039 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 C14orf80Q86SX3 495 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 HS6ST3Q8IZP7 471 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 TNS4Q8IZW8 715 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 NPWQ8N729 165 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 FAM71DQ8N9W8 422 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 PLD4Q96BZ4 506 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 RTP4Q96DX8 246 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 SNF8Q96H20 258 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 PRMT1Q99873 361 aaKnown RBP21.43■■□□□ 1.02
PNKP-203ENST00000593946 FAM129AQ9BZQ8 928 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 HACD1B0YJ81 288 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 TP73O15350 636 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 OLFM2O95897 454 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 IFNB1P01574 187 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 ZSCAN5DPP0CG00 497 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 ADCY8P40145 1251 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 VPS41P49754 854 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 PDZD4Q76G19 769 aaPredicted RBP21.43■■□□□ 1.02
PNKP-203ENST00000593946 CDKL3Q8IVW4 592 aaPredicted RBP21.43■■□□□ 1.02
PNKP-203ENST00000593946 CAVIN3Q969G5 261 aa21.43■■□□□ 1.02
PNKP-203ENST00000593946 KLF16Q9BXK1 252 aaPredicted RBP21.43■■□□□ 1.02
PNKP-203ENST00000593946 MYO18AQ92614 2054 aaKnown RBP21.42■■□□□ 1.02
PNKP-203ENST00000593946 IGLV3-10A0A075B6K4 115 aa21.42■■□□□ 1.02
PNKP-203ENST00000593946 RFPL2O75678 378 aa21.42■■□□□ 1.02
PNKP-203ENST00000593946 FAM153BP0C7A2 387 aa21.42■■□□□ 1.02
PNKP-203ENST00000593946 ITIH2P19823 946 aa21.42■■□□□ 1.02
PNKP-203ENST00000593946 RBL1P28749 1068 aa21.42■■□□□ 1.02
PNKP-203ENST00000593946 SERPINB6P35237 376 aa21.42■■□□□ 1.02
PNKP-203ENST00000593946 AUHQ13825 339 aaKnown RBP21.42■■□□□ 1.02
PNKP-203ENST00000593946 FAM153CQ494X1 144 aa21.42■■□□□ 1.02
PNKP-203ENST00000593946 FBXO25Q8TCJ0 367 aa21.42■■□□□ 1.02
PNKP-203ENST00000593946 ART4Q93070 314 aa21.42■■□□□ 1.02
PNKP-203ENST00000593946 ZFRQ96KR1 1074 aaKnown RBP21.42■■□□□ 1.02
PNKP-203ENST00000593946 LMAN2LQ9H0V9 348 aa21.42■■□□□ 1.02
PNKP-203ENST00000593946 CATSPERBQ9H7T0 1116 aa21.42■■□□□ 1.02
PNKP-203ENST00000593946 ASAH2Q9NR71 780 aa21.42■■□□□ 1.02
PNKP-203ENST00000593946 FAM153AQ9UHL3 310 aa21.42■■□□□ 1.02
PNKP-203ENST00000593946 CLUHO75153 1309 aa21.42■■□□□ 1.02
PNKP-203ENST00000593946 STC2O76061 302 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 CDC25CP30307 473 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 EPHA5P54756 1037 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 PLTPP55058 493 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 PDK1Q15118 436 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 TXNDC8Q6A555 127 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 NADSYN1Q6IA69 706 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 CCDC33Q8N5R6 958 aa21.41■■□□□ 1.02
PNKP-203ENST00000593946 TFB1MQ8WVM0 346 aaKnown RBP21.41■■□□□ 1.02
PNKP-203ENST00000593946 ARNTL2Q8WYA1 636 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms