RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 SLCO1B3Q9NPD5 702 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 SMYD2Q9NRG4 433 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 PCDHA11Q9Y5I1 949 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 MAD1L1Q9Y6D9 718 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 PATJQ8NI35 1801 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 EOMESO95936 686 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 DHRS4L1P0CG22 281 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 MGAT5Q09328 741 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 STEAP4Q687X5 459 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 CYS1Q717R9 158 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 RTN4RL1Q86UN2 441 aaPredicted RBP20.28■□□□□ 0.84
CLIP3-206ENST00000593074 CTAGE3PQ8IX95 158 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 CCDC63Q8NA47 563 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 RSPH1Q8WYR4 309 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 ZNF75CPQ92670 426 aaPredicted RBP20.28■□□□□ 0.84
CLIP3-206ENST00000593074 RMDN2Q96LZ7 410 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 COLEC11Q9BWP8 271 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 VPS11Q9H270 941 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 RXFP1Q9HBX9 757 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 STARD7Q9NQZ5 370 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 SLC17A7Q9P2U7 560 aa20.28■□□□□ 0.84
CLIP3-206ENST00000593074 A0A1W2PQ45 241 aaPredicted RBP20.27■□□□□ 0.84
CLIP3-206ENST00000593074 A0A1W2PQY0 241 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 ARHGEF37A1IGU5 675 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 INPPL1O15357 1258 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 LPXNO60711 386 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 RASSF9O75901 435 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 KRT37O76014 449 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 UBOX5O94941 541 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 ERCC2P18074 760 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 ETV4P43268 484 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 TPI1P60174 286 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 SEPT7Q16181 437 aaKnown RBP20.27■□□□□ 0.84
CLIP3-206ENST00000593074 LRRC8BQ6P9F7 803 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 TRAF7Q6Q0C0 670 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 GLB1LQ6UWU2 654 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 SLC24A5Q71RS6 500 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 THEM5Q8N1Q8 247 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 SLC43A3Q8NBI5 491 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 NETO2Q8NC67 525 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 DMAP1Q9NPF5 467 aaPredicted RBP20.27■□□□□ 0.84
CLIP3-206ENST00000593074 PTPRDP23468 1912 aa20.27■□□□□ 0.84
CLIP3-206ENST00000593074 SNRPAP09012 282 aaKnown RBP20.26■□□□□ 0.83
CLIP3-206ENST00000593074 CXCR3P49682 368 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 ZNF135P52742 658 aaPredicted RBP20.26■□□□□ 0.83
CLIP3-206ENST00000593074 CCDC15Q0P6D6 951 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 PARP6Q2NL67 630 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 ARL13BQ3SXY8 428 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 PDZD4Q76G19 769 aaPredicted RBP20.26■□□□□ 0.83
CLIP3-206ENST00000593074 ZNF567Q8N184 647 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 CCNYQ8ND76 341 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 TRIM56Q9BRZ2 755 aaKnown RBP20.26■□□□□ 0.83
CLIP3-206ENST00000593074 SLC40A1Q9NP59 571 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 IGSF9Q9P2J2 1179 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 TRIM49D1C9J1S8 452 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 CSH1P0DML2 217 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 CSH2P0DML3 217 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 PYGBP11216 843 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 BDNFP23560 247 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 MBTPS1Q14703 1052 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 FAM133BQ5BKY9 247 aaKnown RBP20.26■□□□□ 0.83
CLIP3-206ENST00000593074 OVOS1Q6IE37 1185 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 TRMT10BQ6PF06 316 aaKnown RBP20.26■□□□□ 0.83
CLIP3-206ENST00000593074 CHSY1Q86X52 802 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 TP53INP2Q8IXH6 220 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 PDCD7Q8N8D1 485 aaKnown RBP20.26■□□□□ 0.83
CLIP3-206ENST00000593074 SLAIN1Q8ND83 568 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 OR10T2Q8NGX3 314 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 STAMBPL1Q96FJ0 436 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 SUSD3Q96L08 255 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 TMLHEQ9NVH6 421 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 MOCS1Q9NZB8 636 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 NLRC5Q86WI3 1866 aa20.26■□□□□ 0.83
CLIP3-206ENST00000593074 NCAM2O15394 837 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 YY1P25490 414 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 PSMB4P28070 264 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 MAP2K2P36507 400 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 LGSNQ5TDP6 509 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 FITM2Q8N6M3 262 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 EDEM1Q92611 657 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 MKS1Q9NXB0 559 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 GGT7Q9UJ14 662 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 ALDH1A2O94788 518 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 CCNFP41002 786 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 FAM189BP81408 668 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 BNIP1Q12981 228 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 ARHGEF6Q15052 776 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 MAPRE1Q15691 268 aaKnown RBP20.25■□□□□ 0.83
CLIP3-206ENST00000593074 BSPRYQ5W0U4 402 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 BEND5Q7L4P6 421 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 NPWQ8N729 165 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 MTBPQ96DY7 904 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 OXNAD1Q96HP4 312 aaPredicted RBP20.25■□□□□ 0.83
CLIP3-206ENST00000593074 CEP41Q9BYV8 373 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 C12orf65Q9H3J6 166 aaKnown RBP20.25■□□□□ 0.83
CLIP3-206ENST00000593074 SEPT10Q9P0V9 454 aa20.25■□□□□ 0.83
CLIP3-206ENST00000593074 FRMPD3Q5JV73 1810 aa20.24■□□□□ 0.83
CLIP3-206ENST00000593074 SDR42E2A6NKP2 422 aa20.24■□□□□ 0.83
CLIP3-206ENST00000593074 F5H423 210 aaPredicted RBP20.24■□□□□ 0.83
CLIP3-206ENST00000593074 ARVCFO00192 962 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms