RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 COLGALT1Q8NBJ5 622 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 NLRP7Q8WX94 980 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 CLPTM1LQ96KA5 538 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 YIPF3Q9GZM5 350 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 PDP2Q9P2J9 529 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 APOBEC2Q9Y235 224 aaKnown RBP11.93□□□□□ -0.5
ZNF540-210ENST00000592533 SIN3BO75182 1162 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 PIM1P11309 404 aaPredicted RBP11.93□□□□□ -0.5
ZNF540-210ENST00000592533 ARL4AP40617 200 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 RPL10AP62906 217 aaKnown RBP11.93□□□□□ -0.5
ZNF540-210ENST00000592533 HIC1Q14526 733 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 CCDC153Q494R4 210 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 MDH1BQ5I0G3 518 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 SPANXN3Q5MJ09 141 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 C1orf146Q5VVC0 180 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 C7orf31Q8N865 590 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 PPP1R14CQ8TAE6 165 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 ACTRT2Q8TDY3 377 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 KBTBD7Q8WVZ9 684 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 CPNE1Q99829 537 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 ECSITQ9BQ95 431 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 COPG2Q9UBF2 871 aa11.93□□□□□ -0.5
ZNF540-210ENST00000592533 RNF103O00237 685 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 MFSD11O43934 449 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 LYPLA1O75608 230 aaPredicted RBP11.92□□□□□ -0.5
ZNF540-210ENST00000592533 C6orf222P0C671 652 aaPredicted RBP11.92□□□□□ -0.5
ZNF540-210ENST00000592533 HOXD8P13378 290 aaPredicted RBP11.92□□□□□ -0.5
ZNF540-210ENST00000592533 MGAT1P26572 445 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 GP5P40197 560 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 BAG6P46379 1132 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 IDH3AP50213 366 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 DEUP1Q05D60 604 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 PAFAH1B3Q15102 231 aaKnown RBP11.92□□□□□ -0.5
ZNF540-210ENST00000592533 EFHC1Q5JVL4 640 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 MARCH8Q5T0T0 291 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 GRTP1Q5TC63 336 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 OTUD1Q5VV17 481 aaPredicted RBP11.92□□□□□ -0.5
ZNF540-210ENST00000592533 C9orf57Q5W0N0 161 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 ATG14Q6ZNE5 492 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 ARMCX2Q7L311 632 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 BEST2Q8NFU1 509 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 STON2Q8WXE9 905 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 JADE3Q92613 823 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 CLMNQ96JQ2 1002 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 APOL6Q9BWW8 343 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 MAGEB5Q9BZ81 275 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 FAM192AQ9GZU8 254 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 CXCL16Q9H2A7 254 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 DPEP3Q9H4B8 488 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 S100A14Q9HCY8 104 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 VTA1Q9NP79 307 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 GDAP2Q9NXN4 497 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 MFHAS1Q9Y4C4 1052 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 PSAT1Q9Y617 370 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 COL4A4P53420 1690 aaPredicted RBP11.92□□□□□ -0.5
ZNF540-210ENST00000592533 EIF4E1BA6NMX2 242 aaKnown RBP11.92□□□□□ -0.5
ZNF540-210ENST00000592533 DAB1O75553 588 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 HOXA11P31270 313 aaPredicted RBP11.92□□□□□ -0.5
ZNF540-210ENST00000592533 ARRB2P32121 409 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 NUMBP49757 651 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 COPAP53621 1224 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 XIAPP98170 497 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 PDK1Q15118 436 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 C16orf46Q6P387 395 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 PPP4R1Q8TF05 950 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 P2RY11Q96G91 374 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 LGMNQ99538 433 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 SPATS2LQ9NUQ6 558 aaKnown RBP11.92□□□□□ -0.5
ZNF540-210ENST00000592533 TUBGCP4Q9UGJ1 667 aa11.92□□□□□ -0.5
ZNF540-210ENST00000592533 PIRO00625 290 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 IREB2P48200 963 aaKnown RBP11.91□□□□□ -0.5
ZNF540-210ENST00000592533 CACNA2D1P54289 1103 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 ABCE1P61221 599 aaKnown RBP11.91□□□□□ -0.5
ZNF540-210ENST00000592533 RPL26P61254 145 aaKnown RBP11.91□□□□□ -0.5
ZNF540-210ENST00000592533 DPYSQ14117 519 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 PCBP1Q15365 356 aaKnown RBP eCLIP11.91□□□□□ -0.5
ZNF540-210ENST00000592533 C11orf91Q3C1V1 193 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 NAIF1Q69YI7 327 aaPredicted RBP11.91□□□□□ -0.5
ZNF540-210ENST00000592533 DPY19L2Q6NUT2 758 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 SLC27A1Q6PCB7 646 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 C10orf107Q8IVU9 208 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 CCDC33Q8N5R6 958 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 ZFAND2BQ8WV99 257 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 TSPAN18Q96SJ8 248 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 PPP1R16BQ96T49 567 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 TSC22D3Q99576 134 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 FERMT1Q9BQL6 677 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 SLC17A6Q9P2U8 582 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 PPM1HQ9ULR3 514 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 PCDHB12Q9Y5F1 795 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 RAD54BQ9Y620 910 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 POLBP06746 335 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 MX2P20592 715 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 KCNA4P22459 653 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 GARSP41250 739 aaKnown RBP11.91□□□□□ -0.5
ZNF540-210ENST00000592533 PDE1BQ01064 536 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 CDC16Q13042 620 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 PPIL2Q13356 520 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 IZUMO2Q6UXV1 221 aa11.91□□□□□ -0.5
ZNF540-210ENST00000592533 CLEC14AQ86T13 490 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms