RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 MFN1Q8IWA4 741 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 LGI2Q8N0V4 545 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 CFAP52Q8N1V2 620 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 HJURPQ8NCD3 748 aaPredicted RBP9.52□□□□□ -0.89
DNMT1-223ENST00000591239 MDGA1Q8NFP4 955 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 WFDC5Q8TCV5 224 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 UCMAQ8WVF2 138 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 GAB3Q8WWW8 586 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 RUBCNQ92622 972 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 PGAP3Q96FM1 320 aaPredicted RBP9.52□□□□□ -0.89
DNMT1-223ENST00000591239 TBCBQ99426 244 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 PRMT1Q99873 361 aaKnown RBP9.52□□□□□ -0.89
DNMT1-223ENST00000591239 C11orf70Q9BRQ4 267 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 CIPCQ9C0C6 399 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 TTYH3Q9C0H2 523 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 PIGVQ9NUD9 493 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 SEPT11Q9NVA2 429 aaKnown RBP9.52□□□□□ -0.89
DNMT1-223ENST00000591239 CACNA2D2Q9NY47 1150 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 AIPL1Q9NZN9 384 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 ADAM22Q9P0K1 906 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 GGA2Q9UJY4 613 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 STAP1Q9ULZ2 295 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 OTOGLQ3ZCN5 2332 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 GVINP1Q7Z2Y8 2422 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 A0A1W2PQF6 199 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 TCRBV21S2A2A0A5A6 115 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 WASH3PC4AMC7 463 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 F5H5T6 163 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 NPC1O15118 1278 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 F9P00740 461 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 PABPC1P11940 636 aaKnown RBP9.51□□□□□ -0.89
DNMT1-223ENST00000591239 PBX1P40424 430 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 CXCR3P49682 368 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 SULT1E1P49888 294 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 DEUP1Q05D60 604 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 E2F5Q15329 346 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 USP39Q53GS9 565 aaKnown RBP9.51□□□□□ -0.89
DNMT1-223ENST00000591239 FIGNQ5HY92 759 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 BRMS1LQ5PSV4 323 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 SFMBT2Q5VUG0 894 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 LAIR1Q6GTX8 287 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 TRNP1Q6NT89 227 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 LRSAM1Q6UWE0 723 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 SND1Q7KZF4 910 aaKnown RBP eCLIP9.51□□□□□ -0.89
DNMT1-223ENST00000591239 CHST9Q7L1S5 443 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 PHLDB2Q86SQ0 1253 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 ADIPOR2Q86V24 386 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 PHF13Q86YI8 300 aaPredicted RBP9.51□□□□□ -0.89
DNMT1-223ENST00000591239 CARNMT1Q8N4J0 409 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.51□□□□□ -0.89
DNMT1-223ENST00000591239 ZNF557Q8N988 423 aaPredicted RBP9.51□□□□□ -0.89
DNMT1-223ENST00000591239 FIBINQ8TAL6 211 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 WFIKKN2Q8TEU8 576 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 HMGB4Q8WW32 186 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 SORCS1Q8WY21 1168 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 CFAP57Q96MR6 1250 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 GABRG3Q99928 467 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 HINFPQ9BQA5 517 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 SYT11Q9BT88 431 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 TPSD1Q9BZJ3 242 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 EDEM3Q9BZQ6 932 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 TSPY26PQ9H489 355 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 WDCPQ9H6R7 721 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 CD248Q9HCU0 757 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 METTL5Q9NRN9 209 aaKnown RBP9.51□□□□□ -0.89
DNMT1-223ENST00000591239 TMEM51Q9NW97 253 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 IFNKQ9P0W0 207 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 BCCIPQ9P287 314 aaKnown RBP eCLIP9.51□□□□□ -0.89
DNMT1-223ENST00000591239 THAP10Q9P2Z0 257 aaPredicted RBP9.51□□□□□ -0.89
DNMT1-223ENST00000591239 NCDNQ9UBB6 729 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 PAXBP1Q9Y5B6 917 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 STON1Q9Y6Q2 735 aa9.51□□□□□ -0.89
DNMT1-223ENST00000591239 DCHS1Q96JQ0 3298 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 H0Y626 953 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 DCLK1O15075 740 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 ZBTB24O43167 697 aaPredicted RBP9.5□□□□□ -0.89
DNMT1-223ENST00000591239 PAGE1O75459 146 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 ADCY5O95622 1261 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 CALB1P05937 261 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 ATP5BP06576 529 aaKnown RBP9.5□□□□□ -0.89
DNMT1-223ENST00000591239 KRT3P12035 628 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 PDGFRAP16234 1089 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 GABRG2P18507 467 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 TNFAIP3P21580 790 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 CD70P32970 193 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 IL12RB1P42701 662 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 ATXN1P54253 815 aaKnown RBP9.5□□□□□ -0.89
DNMT1-223ENST00000591239 GSCP56915 257 aaPredicted RBP9.5□□□□□ -0.89
DNMT1-223ENST00000591239 LMAN2Q12907 356 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 PDAP1Q13442 181 aaKnown RBP9.5□□□□□ -0.89
DNMT1-223ENST00000591239 CDH18Q13634 790 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 ENPP2Q13822 863 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 AUHQ13825 339 aaKnown RBP9.5□□□□□ -0.89
DNMT1-223ENST00000591239 ZNF234Q14588 700 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 ASIC2Q16515 512 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 FSCBQ5H9T9 825 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 RABGAP1LQ5R372 815 aa9.5□□□□□ -0.89
DNMT1-223ENST00000591239 TTC39BQ5VTQ0 682 aaPredicted RBP9.5□□□□□ -0.89
DNMT1-223ENST00000591239 E4F1Q66K89 784 aaPredicted RBP9.5□□□□□ -0.89
DNMT1-223ENST00000591239 MBLAC2Q68D91 279 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms