RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 SLC45A4Q5BKX6 768 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 C9orf50Q5SZB4 431 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 ANKS1BQ7Z6G8 1248 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 FMO2Q99518 471 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 CDCA3Q99618 268 aaPredicted RBP13.4□□□□□ -0.26
PTBP1-216ENST00000590887 HERPUD2Q9BSE4 406 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 TRIM51Q9BSJ1 452 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 TRIM31Q9BZY9 425 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 DPH5Q9H2P9 285 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 HAUS2Q9NVX0 235 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 ANAPC5Q9UJX4 755 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 LSM7Q9UK45 103 aaKnown RBP13.4□□□□□ -0.26
PTBP1-216ENST00000590887 NFU1Q9UMS0 254 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 SNX24Q9Y343 169 aa13.4□□□□□ -0.26
PTBP1-216ENST00000590887 TYW5A2RUC4 315 aaKnown RBP13.39□□□□□ -0.27
PTBP1-216ENST00000590887 BHMG1C9JSJ3 638 aaPredicted RBP13.39□□□□□ -0.27
PTBP1-216ENST00000590887 F5H5T6 163 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 ZNF197O14709 1029 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 MSI1O43347 362 aaKnown RBP13.39□□□□□ -0.27
PTBP1-216ENST00000590887 LRIG2O94898 1065 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 MOCS2O96007 188 aaPredicted RBP13.39□□□□□ -0.27
PTBP1-216ENST00000590887 IFNB1P01574 187 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 POU2F2P09086 479 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 SRGAP2BP0DMP2 458 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 MBL2P11226 248 aaPredicted RBP13.39□□□□□ -0.27
PTBP1-216ENST00000590887 CARSP49589 748 aaKnown RBP13.39□□□□□ -0.27
PTBP1-216ENST00000590887 CLCN4P51793 760 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 SPDYCQ5MJ68 293 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 RABGAP1LQ5R372 815 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 BEND6Q5SZJ8 279 aaPredicted RBP13.39□□□□□ -0.27
PTBP1-216ENST00000590887 NCBP2-AS2Q69YL0 99 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 TIGD7Q6NT04 549 aaPredicted RBP13.39□□□□□ -0.27
PTBP1-216ENST00000590887 PPP1R21Q6ZMI0 780 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 ZC3H18Q86VM9 953 aaKnown RBP13.39□□□□□ -0.27
PTBP1-216ENST00000590887 DDX42Q86XP3 938 aaKnown RBP eCLIP13.39□□□□□ -0.273e-6■□□□□ 11.1
PTBP1-216ENST00000590887 PYROXD2Q8N2H3 581 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 VAT1Q99536 393 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 TMEM121Q9BTD3 319 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 FRMD8Q9BZ67 464 aaPredicted RBP13.39□□□□□ -0.27
PTBP1-216ENST00000590887 ZYG11BQ9C0D3 744 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 CCSER2Q9H7U1 834 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 VIPAS39Q9H9C1 493 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 SLC28A3Q9HAS3 691 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 ZDHHC7Q9NXF8 308 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 PCDH10Q9P2E7 1040 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 NUDT5Q9UKK9 219 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 TPX2Q9ULW0 747 aaKnown RBP13.39□□□□□ -0.27
PTBP1-216ENST00000590887 HS3ST4Q9Y661 456 aa13.39□□□□□ -0.27
PTBP1-216ENST00000590887 TRAV19A0A0A6YYK7 116 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 ESYT3A0FGR9 886 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 WASH4PA8MWX3 477 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 E9PAM4 449 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 DCLK1O15075 740 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 KCNN4O15554 427 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 ACSL4O60488 711 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 IGLV3-27P01718 113 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 F11P03951 625 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 RHOQP17081 205 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 HDCP19113 662 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 GABRR2P28476 465 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 HOXC13P31276 330 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 PLTPP55058 493 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 MRPS25P82663 173 aaKnown RBP13.38□□□□□ -0.27
PTBP1-216ENST00000590887 SARNPP82979 210 aaKnown RBP13.38□□□□□ -0.27
PTBP1-216ENST00000590887 MORF4L2Q15014 288 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 TTC39BQ5VTQ0 682 aaPredicted RBP13.38□□□□□ -0.27
PTBP1-216ENST00000590887 CCNYQ8ND76 341 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 AENQ8WTP8 325 aaKnown RBP13.38□□□□□ -0.27
PTBP1-216ENST00000590887 ART4Q93070 314 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 PPP1R2P1Q96PQ5 205 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 RUFY1Q96T51 708 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 KLC2Q9H0B6 622 aa13.38□□□□□ -0.27
PTBP1-216ENST00000590887 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.37□□□□□ -0.27
PTBP1-216ENST00000590887 GOLGA6CA6NDK9 693 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 GOLGA6BA6NDN3 693 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 HIDE1A8MVS5 230 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 DNALI1O14645 258 aaPredicted RBP13.37□□□□□ -0.27
PTBP1-216ENST00000590887 GRM6O15303 877 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 COCHO43405 550 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 CLASP2O75122 1294 aaKnown RBP13.37□□□□□ -0.27
PTBP1-216ENST00000590887 OAS1P00973 400 aaKnown RBP13.37□□□□□ -0.27
PTBP1-216ENST00000590887 HMBSP08397 361 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 SPATA31D3P0C874 917 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 GOLGA6DP0CG33 693 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 PECAM1P16284 738 aaPredicted RBP13.37□□□□□ -0.27
PTBP1-216ENST00000590887 RPL21P46778 160 aaKnown RBP13.37□□□□□ -0.27
PTBP1-216ENST00000590887 AP1B1Q10567 949 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 GPS1Q13098 491 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 AUHQ13825 339 aaKnown RBP13.37□□□□□ -0.27
PTBP1-216ENST00000590887 CFAP58Q5T655 872 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 IZUMO3Q5VZ72 239 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 PPP2R2DQ66LE6 453 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 NPNTQ6UXI9 565 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 SPATA31D4Q6ZUB0 917 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 HOOK3Q86VS8 718 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 CHSY1Q86X52 802 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 CCDC117Q8IWD4 279 aaPredicted RBP13.37□□□□□ -0.27
PTBP1-216ENST00000590887 GOLGA6L1Q8N7Z2 621 aa13.37□□□□□ -0.27
PTBP1-216ENST00000590887 RTL3Q8N8U3 475 aaKnown RBP13.37□□□□□ -0.27
PTBP1-216ENST00000590887 NSMCE1Q8WV22 266 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms