RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 UBAP2Q5T6F2 1119 aaKnown RBP10.7□□□□□ -0.7
VPS25-203ENST00000589520 C1orf53Q5VUE5 145 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 NUGGCQ68CJ6 796 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 MSANTD2Q6P1R3 559 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 ANKS3Q6ZW76 656 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 ANKRD33Q7Z3H0 272 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 ANKMY2Q8IV38 441 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 ANKS4BQ8N8V4 417 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 CCNYQ8ND76 341 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 CCDC110Q8TBZ0 833 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 MDM1Q8TC05 714 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 HASPINQ8TF76 798 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 CKAP2Q8WWK9 683 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 HDAC11Q96DB2 347 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 MTBPQ96DY7 904 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 P2RY11Q96G91 374 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 SPATA17Q96L03 361 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 MAGEB18Q96M61 343 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 ZNF317Q96PQ6 595 aaPredicted RBP10.7□□□□□ -0.7
VPS25-203ENST00000589520 CDK5RAP1Q96SZ6 601 aaKnown RBP10.7□□□□□ -0.7
VPS25-203ENST00000589520 PAFAH2Q99487 392 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 EBNA1BP2Q99848 306 aaKnown RBP10.7□□□□□ -0.7
VPS25-203ENST00000589520 PLCD4Q9BRC7 762 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 TRABDQ9H4I3 376 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 RETREG1Q9H6L5 497 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 COX16Q9P0S2 106 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 ZC3H7BQ9UGR2 993 aaKnown RBP10.7□□□□□ -0.7
VPS25-203ENST00000589520 GOLGA6L7A0A1B0GV03 622 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 WASH4PA8MWX3 477 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 TM9SF1O15321 606 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 MFSD11O43934 449 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 KIAA0754O94854 1291 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 METTL18O95568 372 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 CPP00450 1065 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 APOEP02649 317 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 ITGB1P05556 798 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 INHBAP08476 426 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 PRKCHP24723 683 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 CCNCP24863 283 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 CNTFP26441 200 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 GCAP28676 217 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 SSTR1P30872 391 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 HOXC13P31276 330 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 RFC2P35250 354 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 SERPINB9P50453 376 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 RPL10AP62906 217 aaKnown RBP10.69□□□□□ -0.7
VPS25-203ENST00000589520 PITX1P78337 314 aaPredicted RBP10.69□□□□□ -0.7
VPS25-203ENST00000589520 GALNT2Q10471 571 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 DNAJC3Q13217 504 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 FRG1Q14331 258 aaKnown RBP10.69□□□□□ -0.7
VPS25-203ENST00000589520 SPARCL1Q14515 664 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 PRPSAP1Q14558 356 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 ITIH4Q14624 930 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 FAM171A1Q5VUB5 890 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 TAC4Q86UU9 113 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 CAND1Q86VP6 1230 aaKnown RBP10.69□□□□□ -0.7
VPS25-203ENST00000589520 SLC26A11Q86WA9 606 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 SRRM1Q8IYB3 904 aaKnown RBP10.69□□□□□ -0.7
VPS25-203ENST00000589520 CACNA2D3Q8IZS8 1091 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 CYP4X1Q8N118 509 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 ZNF276Q8N554 614 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 GSDMBQ8TAX9 411 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 SLC44A1Q8WWI5 657 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 CDKL2Q92772 493 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 TTC17Q96AE7 1141 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 SIGLEC10Q96LC7 697 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 TSGA13Q96PP4 275 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 PRMT1Q99873 361 aaKnown RBP10.69□□□□□ -0.7
VPS25-203ENST00000589520 PRDM12Q9H4Q4 367 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 TMEM30AQ9NV96 361 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 SAMD15Q9P1V8 674 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 HSFX1Q9UBD0 423 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 TBK1Q9UHD2 729 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 TLR6Q9Y2C9 796 aa10.69□□□□□ -0.7
VPS25-203ENST00000589520 TCRBV9S1A1TA0A576 114 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 RNF103O00237 685 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 KRT37O76014 449 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 KRT38O76015 456 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 LRIG2O94898 1065 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 SUN1O94901 812 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 DRD4P21917 467 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 YWHAQP27348 245 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 EPHB2P29323 1055 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 GARSP41250 739 aaKnown RBP10.68□□□□□ -0.7
VPS25-203ENST00000589520 NPY2RP49146 381 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 SEC24CP53992 1094 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 SEPT7Q16181 437 aaKnown RBP10.68□□□□□ -0.7
VPS25-203ENST00000589520 TEX44Q53QW1 395 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 TTC39BQ5VTQ0 682 aaPredicted RBP10.68□□□□□ -0.7
VPS25-203ENST00000589520 STEAP4Q687X5 459 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 TIGD7Q6NT04 549 aaPredicted RBP10.68□□□□□ -0.7
VPS25-203ENST00000589520 RGS9BPQ6ZS82 235 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 DENND5BQ6ZUT9 1274 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 PID1Q7Z2X4 250 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 LINC00523Q86TU6 105 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 TAX1BP1Q86VP1 789 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 LRRC6Q86X45 466 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 SCN4BQ8IWT1 228 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 CRIPAKQ8N1N5 446 aa10.68□□□□□ -0.7
VPS25-203ENST00000589520 LRRC43Q8N309 656 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms