RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 MCM3P25205 808 aa22.98■■□□□ 1.27
ATG4D-209ENST00000588857 NR2C2P49116 596 aa22.98■■□□□ 1.27
ATG4D-209ENST00000588857 EIF3EP60228 445 aaKnown RBP22.98■■□□□ 1.27
ATG4D-209ENST00000588857 CYP4F8P98187 520 aa22.98■■□□□ 1.27
ATG4D-209ENST00000588857 NRG1Q02297 640 aaPredicted RBP22.98■■□□□ 1.27
ATG4D-209ENST00000588857 NOMO1Q15155 1222 aa22.98■■□□□ 1.27
ATG4D-209ENST00000588857 PPP1R7Q15435 360 aa22.98■■□□□ 1.27
ATG4D-209ENST00000588857 RWDD4Q6NW29 188 aaKnown RBP22.98■■□□□ 1.27
ATG4D-209ENST00000588857 PDZD4Q76G19 769 aaPredicted RBP22.98■■□□□ 1.27
ATG4D-209ENST00000588857 GSTA5Q7RTV2 222 aa22.98■■□□□ 1.27
ATG4D-209ENST00000588857 JAMLQ86YT9 394 aa22.98■■□□□ 1.27
ATG4D-209ENST00000588857 LEMD2Q8NC56 503 aa22.98■■□□□ 1.27
ATG4D-209ENST00000588857 SLC35B2Q8TB61 432 aa22.98■■□□□ 1.27
ATG4D-209ENST00000588857 RUBCNQ92622 972 aa22.98■■□□□ 1.27
ATG4D-209ENST00000588857 SLCO2A1Q92959 643 aa22.98■■□□□ 1.27
ATG4D-209ENST00000588857 PNKPQ96T60 521 aa22.98■■□□□ 1.27
ATG4D-209ENST00000588857 CDCA3Q99618 268 aaPredicted RBP22.98■■□□□ 1.27
ATG4D-209ENST00000588857 DRG1Q9Y295 367 aaKnown RBP22.98■■□□□ 1.27
ATG4D-209ENST00000588857 UTP11Q9Y3A2 253 aaKnown RBP22.98■■□□□ 1.27
ATG4D-209ENST00000588857 ERCC2P18074 760 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 PTGIRP43119 386 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 KCNQ1P51787 676 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 GUCY2DQ02846 1103 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 PIK3R6Q5UE93 754 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 NCBP2-AS2Q69YL0 99 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 TMCO3Q6UWJ1 677 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 LRRC31Q6UY01 552 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 BZW1Q7L1Q6 419 aaKnown RBP22.97■■□□□ 1.27
ATG4D-209ENST00000588857 IFT20Q8IY31 132 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 ARL14EPQ8N8R7 260 aaPredicted RBP22.97■■□□□ 1.27
ATG4D-209ENST00000588857 TBC1D31Q96DN5 1066 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 CYP2S1Q96SQ9 504 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 HINFPQ9BQA5 517 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 KLF16Q9BXK1 252 aaPredicted RBP22.97■■□□□ 1.27
ATG4D-209ENST00000588857 PRKD2Q9BZL6 878 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 RAB17Q9H0T7 212 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 ETNK2Q9NVF9 386 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 DOCK4Q8N1I0 1966 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 CCDC195A0A1B0GUA6 201 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 ITGAVP06756 1048 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 SLC11A2P49281 568 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 EPHA5P54756 1037 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 MS4A13Q5J8X5 152 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 SYDE1Q6ZW31 735 aaPredicted RBP22.97■■□□□ 1.27
ATG4D-209ENST00000588857 GKN1Q9NS71 199 aa22.97■■□□□ 1.27
ATG4D-209ENST00000588857 DNMT3BQ9UBC3 853 aaKnown RBP22.97■■□□□ 1.27
ATG4D-209ENST00000588857 CLUHO75153 1309 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 TRAV19A0A0A6YYK7 116 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 E9PAM4 449 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 DCLK1O15075 740 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 FGF10O15520 208 aaPredicted RBP22.96■■□□□ 1.27
ATG4D-209ENST00000588857 OLFM2O95897 454 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 CKMP06732 381 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 RHOP08100 348 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 POU2F2P09086 479 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 RBP3P10745 1247 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 PFKLP17858 780 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 GBE1Q04446 702 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 OASLQ15646 514 aaKnown RBP22.96■■□□□ 1.27
ATG4D-209ENST00000588857 WDR93Q6P2C0 686 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 ZC3H18Q86VM9 953 aaKnown RBP22.96■■□□□ 1.27
ATG4D-209ENST00000588857 MAB21L3Q8N8X9 362 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 TRIM51Q9BSJ1 452 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 CATSPERBQ9H7T0 1116 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 EPB41L5Q9HCM4 733 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 PRDM6Q9NQX0 595 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 SMPD4Q9NXE4 827 aa22.96■■□□□ 1.27
ATG4D-209ENST00000588857 PRRC2BQ5JSZ5 2229 aaKnown RBP22.96■■□□□ 1.27
ATG4D-209ENST00000588857 H7C0C1 242 aa22.95■■□□□ 1.26
ATG4D-209ENST00000588857 STC2O76061 302 aa22.95■■□□□ 1.26
ATG4D-209ENST00000588857 IRF1P10914 325 aa22.95■■□□□ 1.26
ATG4D-209ENST00000588857 GJA1P17302 382 aa22.95■■□□□ 1.26
ATG4D-209ENST00000588857 ATP5OP48047 213 aa22.95■■□□□ 1.26
ATG4D-209ENST00000588857 AUHQ13825 339 aaKnown RBP22.95■■□□□ 1.26
ATG4D-209ENST00000588857 PAFAH1B3Q15102 231 aaKnown RBP22.95■■□□□ 1.26
ATG4D-209ENST00000588857 ARHGAP15Q53QZ3 475 aa22.95■■□□□ 1.26
ATG4D-209ENST00000588857 MANEALQ5VSG8 457 aa22.95■■□□□ 1.26
ATG4D-209ENST00000588857 RAP1GAP2Q684P5 730 aa22.95■■□□□ 1.26
ATG4D-209ENST00000588857 DARS2Q6PI48 645 aaKnown RBP22.95■■□□□ 1.26
ATG4D-209ENST00000588857 SLC22A12Q96S37 553 aa22.95■■□□□ 1.26
ATG4D-209ENST00000588857 PIDD1Q9HB75 910 aa22.95■■□□□ 1.26
ATG4D-209ENST00000588857 VANGL2Q9ULK5 521 aa22.95■■□□□ 1.26
ATG4D-209ENST00000588857 NUP205Q92621 2012 aa22.95■■□□□ 1.26
ATG4D-209ENST00000588857 NOTCH4Q99466 2003 aa22.95■■□□□ 1.26
ATG4D-209ENST00000588857 HELZP42694 1942 aaKnown RBP22.94■■□□□ 1.26
ATG4D-209ENST00000588857 SGK1O00141 431 aa22.94■■□□□ 1.26
ATG4D-209ENST00000588857 DDX6P26196 483 aaKnown RBP eCLIP22.94■■□□□ 1.26
ATG4D-209ENST00000588857 CORO1AP31146 461 aaKnown RBP22.94■■□□□ 1.26
ATG4D-209ENST00000588857 HOXC13P31276 330 aa22.94■■□□□ 1.26
ATG4D-209ENST00000588857 RBM10P98175 930 aaKnown RBP22.94■■□□□ 1.26
ATG4D-209ENST00000588857 C14orf80Q86SX3 495 aa22.94■■□□□ 1.26
ATG4D-209ENST00000588857 SHKBP1Q8TBC3 707 aa22.94■■□□□ 1.26
ATG4D-209ENST00000588857 RSAD2Q8WXG1 361 aa22.94■■□□□ 1.26
ATG4D-209ENST00000588857 AZIN2Q96A70 460 aa22.94■■□□□ 1.26
ATG4D-209ENST00000588857 ERP44Q9BS26 406 aa22.94■■□□□ 1.26
ATG4D-209ENST00000588857 TMEM121Q9BTD3 319 aa22.94■■□□□ 1.26
ATG4D-209ENST00000588857 IGFLR1Q9H665 355 aa22.94■■□□□ 1.26
ATG4D-209ENST00000588857 DTLQ9NZJ0 730 aa22.94■■□□□ 1.26
ATG4D-209ENST00000588857 RAB21Q9UL25 225 aa22.94■■□□□ 1.26
ATG4D-209ENST00000588857 MFHAS1Q9Y4C4 1052 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms