RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 DMDP11532 3685 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 CACNA1HO95180 2353 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 SSU72P8A0A1W2PR75 194 aa20.91■□□□□ 0.94
DDX39A-207ENST00000588542 TBC1D3BA6NDS4 549 aa20.91■□□□□ 0.94
DDX39A-207ENST00000588542 PRRT4C9JH25 899 aa20.91■□□□□ 0.94
DDX39A-207ENST00000588542 KIR2DL1P43626 348 aaPredicted RBP20.91■□□□□ 0.94
DDX39A-207ENST00000588542 ZNF143P52747 638 aaPredicted RBP20.91■□□□□ 0.94
DDX39A-207ENST00000588542 SEC13P55735 322 aa20.91■□□□□ 0.94
DDX39A-207ENST00000588542 HDAC4P56524 1084 aa20.91■□□□□ 0.94
DDX39A-207ENST00000588542 MTA1Q13330 715 aa20.91■□□□□ 0.94
DDX39A-207ENST00000588542 ANGPT1Q15389 498 aa20.91■□□□□ 0.94
DDX39A-207ENST00000588542 TSR1Q2NL82 804 aaKnown RBP20.91■□□□□ 0.94
DDX39A-207ENST00000588542 EMC10Q5UCC4 262 aa20.91■□□□□ 0.94
DDX39A-207ENST00000588542 FAM131BQ86XD5 332 aa20.91■□□□□ 0.94
DDX39A-207ENST00000588542 CFAP52Q8N1V2 620 aa20.91■□□□□ 0.94
DDX39A-207ENST00000588542 HJURPQ8NCD3 748 aaPredicted RBP20.91■□□□□ 0.94
DDX39A-207ENST00000588542 RPLP0P6Q8NHW5 317 aa20.91■□□□□ 0.94
DDX39A-207ENST00000588542 WFDC5Q8TCV5 224 aa20.91■□□□□ 0.94
DDX39A-207ENST00000588542 PRMT8Q9NR22 394 aaPredicted RBP20.91■□□□□ 0.94
DDX39A-207ENST00000588542 PAXBP1Q9Y5B6 917 aa20.91■□□□□ 0.94
DDX39A-207ENST00000588542 CCP110O43303 1012 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 LAMTOR5O43504 91 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 MYBL1P10243 752 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 GGCXP38435 758 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 SATB1Q01826 763 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 GFPT1Q06210 699 aaPredicted RBP20.9■□□□□ 0.94
DDX39A-207ENST00000588542 AUHQ13825 339 aaKnown RBP20.9■□□□□ 0.94
DDX39A-207ENST00000588542 SLC18A3Q16572 532 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 GEN1Q17RS7 908 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 C2orf27AQ580R0 203 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 CCDC122Q5T0U0 273 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 C10orf76Q5T2E6 689 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 ARTNQ5T4W7 220 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 FBXL22Q6P050 247 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 DCUN1D2Q6PH85 259 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 C14orf80Q86SX3 495 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 FAM172AQ8WUF8 416 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 TRIM11Q96F44 468 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 CNPY3Q9BT09 278 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 TRIM7Q9C029 511 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 POLR3BQ9NW08 1133 aaPredicted RBP20.9■□□□□ 0.94
DDX39A-207ENST00000588542 STIM2Q9P246 746 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 STARD13Q9Y3M8 1113 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 SNX10Q9Y5X0 201 aa20.9■□□□□ 0.94
DDX39A-207ENST00000588542 TMEM191CA6NGB0 347 aa20.89■□□□□ 0.93
DDX39A-207ENST00000588542 F5H5T6 163 aa20.89■□□□□ 0.93
DDX39A-207ENST00000588542 HLA-FP30511 346 aa20.89■□□□□ 0.93
DDX39A-207ENST00000588542 MRPS21P82921 87 aaKnown RBP20.89■□□□□ 0.93
DDX39A-207ENST00000588542 ZNF252P-AS1Q0IIN9 211 aa20.89■□□□□ 0.93
DDX39A-207ENST00000588542 KIAA0907Q7Z7F0 614 aaPredicted RBP20.89■□□□□ 0.93
DDX39A-207ENST00000588542 ZNF683Q8IZ20 524 aa20.89■□□□□ 0.93
DDX39A-207ENST00000588542 IGSF8Q969P0 613 aa20.89■□□□□ 0.93
DDX39A-207ENST00000588542 LMLNQ96KR4 655 aa20.89■□□□□ 0.93
DDX39A-207ENST00000588542 SIK2Q9H0K1 926 aa20.89■□□□□ 0.93
DDX39A-207ENST00000588542 THAP2Q9H0W7 228 aa20.89■□□□□ 0.93
DDX39A-207ENST00000588542 NHEJ1Q9H9Q4 299 aaPredicted RBP20.89■□□□□ 0.93
DDX39A-207ENST00000588542 ZDHHC4Q9NPG8 344 aa20.89■□□□□ 0.93
DDX39A-207ENST00000588542 MYO1AQ9UBC5 1043 aa20.89■□□□□ 0.93
DDX39A-207ENST00000588542 MUC22E2RYF6 1773 aaPredicted RBP20.89■□□□□ 0.93
DDX39A-207ENST00000588542 MYO15AQ9UKN7 3530 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 EML5Q05BV3 1969 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 ANKRD62A6NC57 917 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 H0Y858 1186 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 PAPSS2O95340 614 aaPredicted RBP20.88■□□□□ 0.93
DDX39A-207ENST00000588542 TDGF1P13385 188 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 HOXC13P31276 330 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 TIE1P35590 1138 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 CXCL12P48061 93 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 IRAK1P51617 712 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 CCR3P51677 355 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 GALCP54803 685 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 C5orf22Q49AR2 442 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 TMEM215Q68D42 235 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 NUDT18Q6ZVK8 323 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 CIR1Q86X95 450 aaPredicted RBP20.88■□□□□ 0.93
DDX39A-207ENST00000588542 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.88■□□□□ 0.934e-10■■■■□ 21.2
DDX39A-207ENST00000588542 IL17RCQ8NAC3 791 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 CCDC26Q8TAB7 109 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 FIBINQ8TAL6 211 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 C1orf74Q96LT6 269 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 HAPLN3Q96S86 360 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 FBXO4Q9UKT5 387 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 VANGL2Q9ULK5 521 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 SCINQ9Y6U3 715 aa20.88■□□□□ 0.93
DDX39A-207ENST00000588542 VPS13AQ96RL7 3174 aa20.87■□□□□ 0.93
DDX39A-207ENST00000588542 TYW5A2RUC4 315 aaKnown RBP20.87■□□□□ 0.93
DDX39A-207ENST00000588542 K7ESF4 209 aa20.87■□□□□ 0.93
DDX39A-207ENST00000588542 ATG13O75143 517 aa20.87■□□□□ 0.93
DDX39A-207ENST00000588542 CYP1A2P05177 515 aa20.87■□□□□ 0.93
DDX39A-207ENST00000588542 ADRA1BP35368 520 aa20.87■□□□□ 0.93
DDX39A-207ENST00000588542 EGFLAMQ63HQ2 1017 aa20.87■□□□□ 0.93
DDX39A-207ENST00000588542 TSSK4Q6SA08 328 aa20.87■□□□□ 0.93
DDX39A-207ENST00000588542 ANKS1BQ7Z6G8 1248 aa20.87■□□□□ 0.93
DDX39A-207ENST00000588542 MFN1Q8IWA4 741 aa20.87■□□□□ 0.93
DDX39A-207ENST00000588542 ALLCQ8N6M5 410 aa20.87■□□□□ 0.93
DDX39A-207ENST00000588542 CCDC185Q8N715 623 aa20.87■□□□□ 0.93
DDX39A-207ENST00000588542 ARHGEF26Q96DR7 871 aa20.87■□□□□ 0.93
DDX39A-207ENST00000588542 DEF6Q9H4E7 631 aa20.87■□□□□ 0.93
DDX39A-207ENST00000588542 ABCB8Q9NUT2 735 aa20.87■□□□□ 0.93
DDX39A-207ENST00000588542 LUC7L3O95232 432 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms