RNA–Protein interactions for RNA: ENST00000588066.5

NEDD4L-221, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-221ENST00000588066 SCD5Q86SK9 330 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 TDRPQ86YL5 185 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 CCNJLQ8IV13 435 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 GPR65Q8IYL9 337 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 PYROXD2Q8N2H3 581 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 SH2D3CQ8N5H7 860 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 SCAMP5Q8TAC9 235 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 UHMK1Q8TAS1 419 aaKnown RBP9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 ADAM32Q8TC27 787 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 OVCA2Q8WZ82 227 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 CENPTQ96BT3 561 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 TBC1D31Q96DN5 1066 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 TMEM169Q96HH4 297 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 C1orf74Q96LT6 269 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 SEPT5Q99719 369 aaPredicted RBP9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 ADAM33Q9BZ11 813 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 DNAJC17Q9NVM6 304 aaKnown RBP9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 LGALS13Q9UHV8 139 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 TLR6Q9Y2C9 796 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 SSX2IPQ9Y2D8 614 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 ACTL7BQ9Y614 415 aa9.06□□□□□ -0.96
NEDD4L-221ENST00000588066 PTPRDP23468 1912 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 NLRC5Q86WI3 1866 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 A0A1W2PQH9 124 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 FAM92AA1XBS5 289 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 GOLGA8MH3BSY2 632 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 RNF103O00237 685 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 TRDMT1O14717 391 aaKnown RBP9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 KIAA0355O15063 1070 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 MFSD11O43934 449 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 TBC1D4O60343 1298 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 SHOX2O60902 331 aaPredicted RBP9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 PAGE1O75459 146 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 UPP2O95045 317 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 CPP00450 1065 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 TIMP1P01033 207 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 RAG1P15918 1043 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 GBP2P32456 591 aaPredicted RBP9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 STX2P32856 288 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 PPM1AP35813 382 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 MMP13P45452 471 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 ATP1A2P50993 1020 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 RABGGTBP53611 331 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 PPIDQ08752 370 aaKnown RBP9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 SLC10A2Q12908 348 aaPredicted RBP9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 VEPH1Q14D04 833 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 TRIP4Q15650 581 aaPredicted RBP9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 ANKRD20A2Q5SQ80 823 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 LGSNQ5TDP6 509 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 ANKRD20A1Q5TYW2 823 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 ANKRD20A3Q5VUR7 823 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 SLC8B1Q6J4K2 584 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 RWDD4Q6NW29 188 aaKnown RBP9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 ZNF276Q8N554 614 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 GPATCH11Q8N954 259 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 STKLD1Q8NE28 680 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 FBXO22Q8NEZ5 403 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 CCDC110Q8TBZ0 833 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 MICAL1Q8TDZ2 1067 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 EPS8L3Q8TE67 593 aaKnown RBP9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 TOP1MTQ969P6 601 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 ZBTB9Q96C00 473 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 HDAC11Q96DB2 347 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 IGSF21Q96ID5 467 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 PGLYRP2Q96PD5 576 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 CYTH2Q99418 400 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 SELENOSQ9BQE4 189 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 NAT9Q9BTE0 207 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 HERC2P3Q9BVR0 1158 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 UBE2OQ9C0C9 1292 aaKnown RBP9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 PRDM12Q9H4Q4 367 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 RETREG1Q9H6L5 497 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 C10orf88Q9H8K7 445 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 ETNK1Q9HBU6 452 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 SPG21Q9NZD8 308 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 CALCOCO1Q9P1Z2 691 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 PCDH10Q9P2E7 1040 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 KLHL8Q9P2G9 620 aaPredicted RBP9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 IGSF9Q9P2J2 1179 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 AFF4Q9UHB7 1163 aaKnown RBP9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 ZMYND8Q9ULU4 1186 aaPredicted RBP9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 IKBKGQ9Y6K9 419 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 CLUHO75153 1309 aa9.05□□□□□ -0.96
NEDD4L-221ENST00000588066 SLC38A8A6NNN8 435 aa9.04□□□□□ -0.96
NEDD4L-221ENST00000588066 NT5C1B-RDH14C9J2C7 533 aa9.04□□□□□ -0.96
NEDD4L-221ENST00000588066 NEBLO76041 1014 aa9.04□□□□□ -0.96
NEDD4L-221ENST00000588066 TMEM63AO94886 807 aa9.04□□□□□ -0.96
NEDD4L-221ENST00000588066 LRIG2O94898 1065 aa9.04□□□□□ -0.96
NEDD4L-221ENST00000588066 SOD2P04179 222 aa9.04□□□□□ -0.96
NEDD4L-221ENST00000588066 URODP06132 367 aa9.04□□□□□ -0.96
NEDD4L-221ENST00000588066 APRTP07741 180 aa9.04□□□□□ -0.96
NEDD4L-221ENST00000588066 CSH1P0DML2 217 aa9.04□□□□□ -0.96
NEDD4L-221ENST00000588066 CSH2P0DML3 217 aa9.04□□□□□ -0.96
NEDD4L-221ENST00000588066 SRGAP2BP0DMP2 458 aa9.04□□□□□ -0.96
NEDD4L-221ENST00000588066 DNAJB2P25686 324 aa9.04□□□□□ -0.96
NEDD4L-221ENST00000588066 HOXC13P31276 330 aa9.04□□□□□ -0.96
NEDD4L-221ENST00000588066 MSH2P43246 934 aa9.04□□□□□ -0.96
NEDD4L-221ENST00000588066 SLCO1A2P46721 670 aa9.04□□□□□ -0.96
NEDD4L-221ENST00000588066 PPP3CCP48454 512 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms