RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 PLA2G4CQ9UP65 541 aa12.11□□□□□ -0.47
LIG3-207ENST00000586119 ANKRD6Q9Y2G4 727 aa12.11□□□□□ -0.47
LIG3-207ENST00000586119 HBS1LQ9Y450 684 aaKnown RBP12.11□□□□□ -0.47
LIG3-207ENST00000586119 FAM47DPA6NHR8 397 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 CBX4O00257 560 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 O00370 1275 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 WNT9AO14904 365 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 CETN3O15182 167 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 DKK1O94907 266 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 SEMA4FO95754 770 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 CER1O95813 267 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 ZNF883P0CG24 379 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 EPB41P11171 864 aaKnown RBP12.1□□□□□ -0.47
LIG3-207ENST00000586119 BCAT1P54687 386 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 DAOAP59103 153 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 BST2Q10589 180 aaKnown RBP12.1□□□□□ -0.47
LIG3-207ENST00000586119 EDRF1Q3B7T1 1238 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 SOWAHCQ53LP3 525 aaPredicted RBP12.1□□□□□ -0.47
LIG3-207ENST00000586119 SGO2Q562F6 1265 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 FAM133BQ5BKY9 247 aaKnown RBP12.1□□□□□ -0.47
LIG3-207ENST00000586119 PIK3R6Q5UE93 754 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 NADSYN1Q6IA69 706 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 MMS22LQ6ZRQ5 1243 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.1□□□□□ -0.47
LIG3-207ENST00000586119 CRELD1Q96HD1 420 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 KIAA1522Q9P206 1035 aaPredicted RBP12.1□□□□□ -0.47
LIG3-207ENST00000586119 SERGEFQ9UGK8 458 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 INTS6Q9UL03 887 aaKnown RBP12.1□□□□□ -0.47
LIG3-207ENST00000586119 COQ4Q9Y3A0 265 aa12.1□□□□□ -0.47
LIG3-207ENST00000586119 TRABD2BA6NFA1 517 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 FYNP06241 537 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 IGHV4-34P06331 123 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 DLDP09622 509 aaKnown RBP12.09□□□□□ -0.47
LIG3-207ENST00000586119 VDRP11473 427 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 CTSOP43234 321 aaPredicted RBP12.09□□□□□ -0.47
LIG3-207ENST00000586119 AFF3P51826 1226 aaKnown RBP12.09□□□□□ -0.47
LIG3-207ENST00000586119 SLC8A3P57103 927 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 RPS24P62847 133 aaKnown RBP12.09□□□□□ -0.47
LIG3-207ENST00000586119 CYP4F3Q08477 520 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 FSCBQ5H9T9 825 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 ISM2Q6H9L7 571 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 IL27RAQ6UWB1 636 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 PDZD3Q86UT5 571 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 GATAD2AQ86YP4 633 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 CFAP52Q8N1V2 620 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 TTC39CQ8N584 583 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 WFIKKN2Q8TEU8 576 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 SLC35F5Q8WV83 523 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 KCTD13Q8WZ19 329 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 FAXDC2Q96IV6 333 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 MRGPRX3Q96LB0 322 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 PRICKLE1Q96MT3 831 aaPredicted RBP12.09□□□□□ -0.47
LIG3-207ENST00000586119 BBC3Q96PG8 261 aaPredicted RBP12.09□□□□□ -0.47
LIG3-207ENST00000586119 DNAI2Q9GZS0 605 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 BTBD1Q9H0C5 482 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 ABCC13Q9NSE7 274 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 OLA1Q9NTK5 396 aaKnown RBP12.09□□□□□ -0.47
LIG3-207ENST00000586119 HESX1Q9UBX0 185 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 XPO7Q9UIA9 1087 aaKnown RBP12.09□□□□□ -0.47
LIG3-207ENST00000586119 PCDHGB2Q9Y5G2 931 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 MYLKQ15746 1914 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 ARID1BQ8NFD5 2236 aaPredicted RBP12.09□□□□□ -0.47
LIG3-207ENST00000586119 SHROOM3Q8TF72 1996 aa12.09□□□□□ -0.47
LIG3-207ENST00000586119 A0A1W2PQ27 194 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 A0A1W2PQ64 194 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 FLRT2O43155 660 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 ACSL4O60488 711 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 SIN3BO75182 1162 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 IGLV3-27P01718 113 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 DNTTP04053 509 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 WNT1P04628 370 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 C7P10643 843 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 POLR2EP19388 210 aaKnown RBP12.08□□□□□ -0.48
LIG3-207ENST00000586119 BRD2P25440 801 aaKnown RBP12.08□□□□□ -0.48
LIG3-207ENST00000586119 CTSKP43235 329 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 CAMK2BQ13554 666 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 MSANTD2Q6P1R3 559 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 TMEM270Q6UE05 265 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 LCLAT1Q6UWP7 414 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 DHRS13Q6UX07 377 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 DHX40Q8IX18 779 aaKnown RBP12.08□□□□□ -0.48
LIG3-207ENST00000586119 AHI1Q8N157 1196 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 SIX6OS1Q8N1H7 587 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 ADAM32Q8TC27 787 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 SLC35C1Q96A29 364 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 FCRL2Q96LA5 508 aaPredicted RBP12.08□□□□□ -0.48
LIG3-207ENST00000586119 SLC6A18Q96N87 628 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 MIS12Q9H081 205 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 NUCKS1Q9H1E3 243 aaKnown RBP12.08□□□□□ -0.48
LIG3-207ENST00000586119 NEUROG2Q9H2A3 272 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 CNGB3Q9NQW8 809 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 SLCO3A1Q9UIG8 710 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 PCDHB4Q9Y5E5 795 aa12.08□□□□□ -0.48
LIG3-207ENST00000586119 A0A1W2PP55 124 aa12.07□□□□□ -0.48
LIG3-207ENST00000586119 TTC34A8MYJ7 566 aa12.07□□□□□ -0.48
LIG3-207ENST00000586119 MID1O15344 667 aa12.07□□□□□ -0.48
LIG3-207ENST00000586119 STX10O60499 249 aa12.07□□□□□ -0.48
LIG3-207ENST00000586119 CD27P26842 260 aa12.07□□□□□ -0.48
LIG3-207ENST00000586119 CSKP41240 450 aa12.07□□□□□ -0.48
LIG3-207ENST00000586119 GALCP54803 685 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms