RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	VAMP2	P63027	116 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	ACOX1	Q15067	660 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	RALBP1	Q15311	655 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	EZH2	Q15910	746 aa	Known RBP	4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	CERKL	Q49MI3	558 aa	Predicted RBP	4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SLC9A4	Q6AI14	798 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	CYP26C1	Q6V0L0	522 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	USP49	Q70CQ1	688 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SRRM1	Q8IYB3	904 aa	Known RBP	4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	CLASRP	Q8N2M8	674 aa	Known RBP	4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SIRT6	Q8N6T7	355 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	NAXE	Q8NCW5	288 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SEMA6D	Q8NFY4	1073 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SUN3	Q8TAQ9	357 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	STYX	Q8WUJ0	223 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	CINP	Q9BW66	212 aa	Predicted RBP	4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SEMA4C	Q9C0C4	833 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	PABPC3	Q9H361	631 aa	Known RBP	4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	ZHX3	Q9H4I2	956 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	NOD2	Q9HC29	1040 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	NRIP3	Q9NQ35	241 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	LIN7C	Q9NUP9	197 aa	Known RBP	4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	GRHPR	Q9UBQ7	328 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	LPAR3	Q9UBY5	353 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	DHX29	Q7Z478	1369 aa	Known RBP	4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	CASKIN1	Q8WXD9	1431 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	UBR1	Q8IWV7	1749 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	PLEKHH2	Q8IVE3	1493 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	MBD5	Q9P267	1494 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	WDR91	A4D1P6	747 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	DNAJC9-AS1	A6NH13	148 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	HMX3	A6NHT5	357 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	UBE2Q2L	H0YL09	131 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754		J3KTA2	159 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	EXOC5	O00471	708 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TSPAN3	O60637	253 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	WDR47	O94967	919 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TJP3	O95049	919 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TFRC	P02786	760 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	AR	P10275	920 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	CYP2D6	P10635	497 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	MYCL	P12524	364 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TNNT1	P13805	278 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	MATN1	P21941	496 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	FPR3	P25089	353 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	CTGF	P29279	349 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	ADD2	P35612	726 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	ACTR2	P61160	394 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	HOXA4	Q00056	320 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TLE2	Q04725	743 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	POSTN	Q15063	836 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	RPS6KA2	Q15349	733 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	L1TD1	Q5T7N2	865 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	ZNF66	Q6ZN08	573 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754		Q6ZWC4	215 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TRABD2A	Q86V40	505 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	CAND1	Q86VP6	1230 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	NOC3L	Q8WTT2	800 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	DAZAP1	Q96EP5	407 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	ZBTB45	Q96K62	511 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	LENG8	Q96PV6	779 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	PAAF1	Q9BRP4	392 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SORBS1	Q9BX66	1292 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SLC29A3	Q9BZD2	475 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	FBXO28	Q9NVF7	368 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	PDP2	Q9P2J9	529 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	RNF7	Q9UBF6	113 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	PI4KB	Q9UBF8	816 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	ADAMTS5	Q9UNA0	930 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	LZTS1	Q9Y250	596 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SLC27A6	Q9Y2P4	619 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	GPR52	Q9Y2T5	361 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	PCDHGB3	Q9Y5G1	929 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	PHLPP1	O60346	1717 aa		4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SAC3D1	A6NKF1	404 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	LINC01548	A6NM66	108 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TISP43	B9A030	160 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	IPO5	O00410	1097 aa	Known RBP	4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	PCDH17	O14917	1159 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	NCAM2	O15394	837 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	EXOC3	O60645	756 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	WDHD1	O75717	1129 aa	Predicted RBP	4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	USP1	O94782	785 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TK1	P04183	234 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	HGF	P14210	728 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	GK	P32189	559 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TXNL4A	P83876	142 aa	Known RBP	4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	ANKRD1	Q15327	319 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	PRAMEF17	Q5VTA0	474 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SULT6B1	Q6IMI4	303 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	CLEC9A	Q6UXN8	241 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	KRT27	Q7Z3Y8	459 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	C2CD5	Q86YS7	1000 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	FTSJ3	Q8IY81	847 aa	Known RBP	4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TMEM57	Q8N5G2	664 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	IL17RE	Q8NFR9	667 aa		4.11	□□□□□ -1.75
PPP4R1-229	ENST00000584754	UBXN10	Q96LJ8	280 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms