RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 TMEM88Q6PEY1 159 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 ZNF474Q6S9Z5 364 aaPredicted RBP4.39□□□□□ -1.71
SKA2-210ENST00000584089 KLHL17Q6TDP4 642 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 RAB11FIP2Q7L804 512 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 RHPN2Q8IUC4 686 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 SLC44A2Q8IWA5 706 aaPredicted RBP4.39□□□□□ -1.71
SKA2-210ENST00000584089 CCDC117Q8IWD4 279 aaPredicted RBP4.39□□□□□ -1.71
SKA2-210ENST00000584089 HMGB4Q8WW32 186 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 KAT2BQ92831 832 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 ZNF778Q96MU6 729 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 MECRQ9BV79 373 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 VPS16Q9H269 839 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 PRDM8Q9NQV8 689 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 LIN7CQ9NUP9 197 aaKnown RBP4.39□□□□□ -1.71
SKA2-210ENST00000584089 RAB21Q9UL25 225 aa4.39□□□□□ -1.71
SKA2-210ENST00000584089 TRPC5Q9UL62 973 aaPredicted RBP4.39□□□□□ -1.71
SKA2-210ENST00000584089 CYP3A7-CYP3A51PA0A087WV96 503 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 SLC22A23A1A5C7 686 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 TLR2O60603 784 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 CNOT3O75175 753 aaKnown RBP4.38□□□□□ -1.71
SKA2-210ENST00000584089 MOSPD3O75425 235 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 KAT7O95251 611 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 FGBP02675 491 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 ST6GAL1P15907 406 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 CYP3A7P24462 503 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 HOXD9P28356 352 aaPredicted RBP4.38□□□□□ -1.71
SKA2-210ENST00000584089 CPA2P48052 419 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 PNLIPRP1P54315 467 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 SLC37A1P57057 533 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 TAS2R50P59544 299 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 TRIM14Q14142 442 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 PDCD2Q16342 344 aaPredicted RBP4.38□□□□□ -1.71
SKA2-210ENST00000584089 TBRG1Q3YBR2 411 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 ANXA2RQ3ZCQ2 193 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 C10orf62Q5T681 223 aaPredicted RBP4.38□□□□□ -1.71
SKA2-210ENST00000584089 TANGO2Q6ICL3 276 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 DHRS13Q6UX07 377 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 FAM57BQ71RH2 274 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 C16orf52Q8NHV5 167 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 STT3BQ8TCJ2 826 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 ZFPM2Q8WW38 1151 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 LTV1Q96GA3 475 aaPredicted RBP4.38□□□□□ -1.71
SKA2-210ENST00000584089 ABHD14AQ9BUJ0 271 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 MAGEH1Q9H213 219 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 PABPC3Q9H361 631 aaKnown RBP4.38□□□□□ -1.71
SKA2-210ENST00000584089 SFXN1Q9H9B4 322 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 MLXIPQ9HAP2 919 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 DAPP1Q9UN19 280 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 C19orf53Q9UNZ5 99 aaPredicted RBP4.38□□□□□ -1.71
SKA2-210ENST00000584089 SLC12A4Q9UP95 1085 aa4.38□□□□□ -1.71
SKA2-210ENST00000584089 TBC1D3DA0A087WVF3 549 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 TBC1D3IA0A087WXS9 549 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 TBC1D3EA0A087X179 549 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 TBC1D3KA0A087X1G2 549 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 TBC1D3BA6NDS4 549 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 TBC1D3FA6NER0 549 aaPredicted RBP4.37□□□□□ -1.71
SKA2-210ENST00000584089 MBD3L5A6NJ08 208 aaPredicted RBP4.37□□□□□ -1.71
SKA2-210ENST00000584089 TBC1D3LB9A6J9 549 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 ADAM10O14672 748 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 PPEF2O14830 753 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 PEX14O75381 377 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 CNTN5O94779 1100 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 TBC1D3HP0C7X1 549 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 TGM2P21980 687 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 FAM3BP58499 235 aaPredicted RBP4.37□□□□□ -1.71
SKA2-210ENST00000584089 TTC22Q5TAA0 569 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 LIPMQ5VYY2 423 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 TBC1D3GQ6DHY5 549 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 TBC1D3CQ6IPX1 549 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 LIN54Q6MZP7 749 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 CCDC174Q6PII3 467 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 TBC1D3Q8IZP1 549 aaPredicted RBP4.37□□□□□ -1.71
SKA2-210ENST00000584089 NANOGP1Q8N7R0 232 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 FAM47BQ8NA70 645 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 SCAMP5Q8TAC9 235 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 OTUD7AQ8TE49 926 aaPredicted RBP4.37□□□□□ -1.71
SKA2-210ENST00000584089 WIPF2Q8TF74 440 aaPredicted RBP4.37□□□□□ -1.71
SKA2-210ENST00000584089 IGFBPL1Q8WX77 278 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 HTATIP2Q9BUP3 242 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 BRD8Q9H0E9 1235 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 TMEM184CQ9NVA4 438 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 TRNAU1APQ9NX07 287 aaKnown RBP4.37□□□□□ -1.71
SKA2-210ENST00000584089 MTMR4Q9NYA4 1195 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 RNF7Q9UBF6 113 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 ZMYM2Q9UBW7 1377 aa4.37□□□□□ -1.71
SKA2-210ENST00000584089 hCG_1642624A0A1W2PR95 340 aa4.36□□□□□ -1.71
SKA2-210ENST00000584089 PTGER1P34995 402 aa4.36□□□□□ -1.71
SKA2-210ENST00000584089 SRSF1Q07955 248 aaKnown RBP eCLIP4.36□□□□□ -1.71
SKA2-210ENST00000584089 FAM83BQ5T0W9 1011 aa4.36□□□□□ -1.71
SKA2-210ENST00000584089 SULT6B1Q6IMI4 303 aa4.36□□□□□ -1.71
SKA2-210ENST00000584089 SHC4Q6S5L8 630 aa4.36□□□□□ -1.71
SKA2-210ENST00000584089 MRPL10Q7Z7H8 261 aaKnown RBP4.36□□□□□ -1.71
SKA2-210ENST00000584089 ANKRD13BQ86YJ7 626 aa4.36□□□□□ -1.71
SKA2-210ENST00000584089 ADGRF3Q8IZF5 1079 aa4.36□□□□□ -1.71
SKA2-210ENST00000584089 EXD3Q8N9H8 876 aa4.36□□□□□ -1.71
SKA2-210ENST00000584089 OR52N4Q8NGI2 321 aa4.36□□□□□ -1.71
SKA2-210ENST00000584089 CPT1BQ92523 772 aa4.36□□□□□ -1.71
SKA2-210ENST00000584089 NPAS1Q99742 590 aa4.36□□□□□ -1.71
SKA2-210ENST00000584089 TUBB6Q9BUF5 446 aa4.36□□□□□ -1.71
SKA2-210ENST00000584089 DDX23Q9BUQ8 820 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms