RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 PPARGC1AQ9UBK2 798 aaKnown RBP12.05□□□□□ -0.48
CDRT1-207ENST00000583965 NCOR1O75376 2440 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 TRIOO75962 3097 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 IGLV3-10A0A075B6K4 115 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 TYW5A2RUC4 315 aaKnown RBP12.04□□□□□ -0.48
CDRT1-207ENST00000583965 E9PAM4 449 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 H3BRJ5 948 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 GFRA2O00451 464 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 DDX3YO15523 660 aaKnown RBP12.04□□□□□ -0.48
CDRT1-207ENST00000583965 ZRANB2O95218 330 aaKnown RBP eCLIP12.04□□□□□ -0.48
CDRT1-207ENST00000583965 NFATC1O95644 943 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 CYBBP04839 570 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 KDELR1P24390 212 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 SLC6A4P31645 630 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 ARL4AP40617 200 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 CETN2P41208 172 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 PEX5P50542 639 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 ARSEP51690 589 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 CDH6P55285 790 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 COPS2P61201 443 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 ZP2Q05996 745 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 KRT81Q14533 505 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 CA9Q16790 459 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 EML3Q32P44 896 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 ATP13A4Q4VNC1 1196 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 MPPE1Q53F39 396 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 RABGAP1LQ5R372 815 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 MPP7Q5T2T1 576 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 MANEALQ5VSG8 457 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 RAP1GAP2Q684P5 730 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 ZNF683Q8IZ20 524 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 RCOR2Q8IZ40 523 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 ADGRG2Q8IZP9 1017 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 LGI2Q8N0V4 545 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 PYROXD2Q8N2H3 581 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 EXD1Q8NHP7 514 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 KRT35Q92764 455 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 TBC1D31Q96DN5 1066 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 KCTD15Q96SI1 283 aaPredicted RBP12.04□□□□□ -0.48
CDRT1-207ENST00000583965 FAM83CQ9BQN1 747 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 ZNF670Q9BS34 389 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 PLA2G2FQ9BZM2 168 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 PRDM16Q9HAZ2 1276 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 KCNK12Q9HB15 430 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 PCDH18Q9HCL0 1135 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 SPHK2Q9NRA0 654 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 GPATCH2LQ9NWQ4 482 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 DONSONQ9NYP3 566 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 LIMD1Q9UGP4 676 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 PACSIN2Q9UNF0 486 aaPredicted RBP12.04□□□□□ -0.48
CDRT1-207ENST00000583965 WNT6Q9Y6F9 365 aa12.04□□□□□ -0.48
CDRT1-207ENST00000583965 MYO18AQ92614 2054 aaKnown RBP12.04□□□□□ -0.48
CDRT1-207ENST00000583965 COL4A3Q01955 1670 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 GOLGA6L7A0A1B0GV03 622 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 LRRD1A4D1F6 860 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 DRGXA6NNA5 263 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 FGF10O15520 208 aaPredicted RBP12.03□□□□□ -0.48
CDRT1-207ENST00000583965 LRIG2O94898 1065 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 KRT1P04264 644 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 HOXC13P31276 330 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 MARCKSL1P49006 195 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 TPI1P60174 286 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 NR1H3Q13133 447 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 PPP6R3Q5H9R7 873 aaPredicted RBP12.03□□□□□ -0.48
CDRT1-207ENST00000583965 FBXL22Q6P050 247 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 RFWD3Q6PCD5 774 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 SYT10Q6XYQ8 523 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 CPA6Q8N4T0 437 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 HJURPQ8NCD3 748 aaPredicted RBP12.03□□□□□ -0.48
CDRT1-207ENST00000583965 RAPGEF5Q92565 580 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 TSC1Q92574 1164 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 ALG3Q92685 438 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 IRF7Q92985 503 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 TMA16Q96EY4 203 aaKnown RBP12.03□□□□□ -0.48
CDRT1-207ENST00000583965 RPRD1AQ96P16 312 aaPredicted RBP12.03□□□□□ -0.48
CDRT1-207ENST00000583965 ASB2Q96Q27 587 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 NAPGQ99747 312 aaPredicted RBP12.03□□□□□ -0.48
CDRT1-207ENST00000583965 TLR10Q9BXR5 811 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 CARD9Q9H257 536 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 LINC00597Q9H2U6 94 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 CATSPERBQ9H7T0 1116 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 TRPV5Q9NQA5 729 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 MARK1Q9P0L2 795 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 STIM2Q9P246 746 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 VANGL2Q9ULK5 521 aa12.03□□□□□ -0.48
CDRT1-207ENST00000583965 NYNRINQ9P2P1 1898 aaKnown RBP12.03□□□□□ -0.48
CDRT1-207ENST00000583965 A0A1B0GVM2 712 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 CTAGE9A4FU28 777 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 TCAF2A6NFQ2 919 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 C19orf67A6NJJ6 358 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 C3orf70A6NLC5 250 aaPredicted RBP12.02□□□□□ -0.49
CDRT1-207ENST00000583965 FAM72CH0Y354 149 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 EEF2KO00418 725 aaKnown RBP12.02□□□□□ -0.49
CDRT1-207ENST00000583965 SCAMP3O14828 347 aaKnown RBP12.02□□□□□ -0.49
CDRT1-207ENST00000583965 CREB3O43889 395 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 SRGAP2O75044 1071 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 ADH1CP00326 375 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 BMP1P13497 986 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 EPHB2P29323 1055 aa12.02□□□□□ -0.49
CDRT1-207ENST00000583965 GDI1P31150 447 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms