RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 MYO6Q9UM54 1294 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 DDNO94850 711 aaPredicted RBP3.94□□□□□ -1.78
SMCHD1-206ENST00000581631 ARP10275 920 aa3.94□□□□□ -1.78
SMCHD1-206ENST00000581631 STAT6P42226 847 aa3.94□□□□□ -1.78
SMCHD1-206ENST00000581631 HILS1P60008 231 aa3.94□□□□□ -1.78
SMCHD1-206ENST00000581631 SEMA5AQ13591 1074 aa3.94□□□□□ -1.78
SMCHD1-206ENST00000581631 KIAA1755Q5JYT7 1200 aa3.94□□□□□ -1.78
SMCHD1-206ENST00000581631 CYB5RLQ6IPT4 315 aa3.94□□□□□ -1.78
SMCHD1-206ENST00000581631 LAS2Q8IYD9 372 aa3.94□□□□□ -1.78
SMCHD1-206ENST00000581631 KAT2BQ92831 832 aa3.94□□□□□ -1.78
SMCHD1-206ENST00000581631 AAMDCQ9H7C9 122 aa3.94□□□□□ -1.78
SMCHD1-206ENST00000581631 METTL14Q9HCE5 456 aaKnown RBP3.94□□□□□ -1.78
SMCHD1-206ENST00000581631 ERVK-5Q9HDB9 667 aa3.94□□□□□ -1.78
SMCHD1-206ENST00000581631 KCNG2Q9UJ96 466 aa3.94□□□□□ -1.78
SMCHD1-206ENST00000581631 TTC34A8MYJ7 566 aa3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 F8W8V4 182 aa3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 LINC01565O15544 149 aa3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 CAMTA2O94983 1202 aa3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 ENO1P06733 434 aaKnown RBP3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 AKR1A1P14550 325 aa3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 IGHMBP2P38935 993 aaKnown RBP3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 SHBQ15464 509 aa3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 PRSS57Q6UWY2 283 aa3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 FAM83HQ6ZRV2 1179 aaPredicted RBP3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 GPSM1Q86YR5 675 aa3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 CLMNQ96JQ2 1002 aa3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 SLC25A32Q9H2D1 315 aa3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 C6orf106Q9H6K1 298 aaPredicted RBP3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 PLAC1Q9HBJ0 212 aa3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 CORO2BQ9UQ03 480 aa3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 LAMP3Q9UQV4 416 aa3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 SNX13Q9Y5W8 968 aa3.93□□□□□ -1.78
SMCHD1-206ENST00000581631 A0A087WZ62 844 aa3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 INAFM1C9JVW0 142 aa3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 PARNO95453 639 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 MT-ND5P03915 603 aa3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 RFPL3SP0C7P2 107 aa3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 ERVFC1-1P60608 527 aa3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 ROR2Q01974 943 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 CRYZQ08257 329 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 WASHC2DQ5SRD0 308 aa3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 LIPMQ5VYY2 423 aa3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 ABLIM2Q6H8Q1 611 aa3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 DGKHQ86XP1 1220 aa3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 CLASRPQ8N2M8 674 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 SNX22Q96L94 193 aa3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 HTATIP2Q9BUP3 242 aa3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 DCLK3Q9C098 648 aa3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 CDCP1Q9H5V8 836 aa3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 TASP1Q9H6P5 420 aa3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 IL21RQ9HBE5 538 aa3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 TBC1D23Q9NUY8 699 aa3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 PLEKHB1Q9UF11 243 aaPredicted RBP3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 ICAM5Q9UMF0 924 aa3.92□□□□□ -1.78
SMCHD1-206ENST00000581631 PQBP1O60828 265 aaKnown RBP3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 UMODP07911 640 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 PKMP14618 531 aaKnown RBP3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 COMPP49747 757 aaPredicted RBP3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 AGTR2P50052 363 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 RASSF2P50749 326 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 ART1P52961 327 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 GAD2Q05329 585 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 ACSM6Q6P461 480 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 PARM1Q6UWI2 310 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 DHRS13Q6UX07 377 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 C7orf57Q8NEG2 295 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 OR52L2PQ8NGH6 319 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 OR52N4Q8NGI2 321 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 GLMPQ8WWB7 406 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 CENPIQ92674 756 aaPredicted RBP3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 ELOVL1Q9BW60 279 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 BTBD1Q9H0C5 482 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 NUP62CLQ9H1M0 184 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 HIF1ANQ9NWT6 349 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 ZNF212Q9UDV6 495 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 FAM50BQ9Y247 325 aa3.91□□□□□ -1.78
SMCHD1-206ENST00000581631 GAGE12JA6NER3 117 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 RHPN2P1A8MT19 583 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 RGS14O43566 566 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 LCATP04180 440 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 YY1P25490 414 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 RFX5P48382 616 aaPredicted RBP3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 PDLIM4P50479 330 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 KIF5AQ12840 1032 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 ANXA2RQ3ZCQ2 193 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 GLE1Q53GS7 698 aaKnown RBP3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 FAM76BQ5HYJ3 339 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 Q5PR19 223 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 RRAGBQ5VZM2 374 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 C9orf57Q5W0N0 161 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 CTU1Q7Z7A3 348 aaKnown RBP3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 EXD3Q8N9H8 876 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 IPCEF1Q8WWN9 437 aaPredicted RBP3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 PHKBQ93100 1093 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 TTC17Q96AE7 1141 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 SEZ6LQ9BYH1 1024 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 ISCUQ9H1K1 167 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 PNPLA8Q9NP80 782 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms