RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	ENGASE	Q8NFI3	743 aa		10.02	□□□□□ -0.81
MSI2-208	ENST00000579466	IGSF8	Q969P0	613 aa		10.02	□□□□□ -0.81
MSI2-208	ENST00000579466	CCDC47	Q96A33	483 aa	Known RBP	10.02	□□□□□ -0.81
MSI2-208	ENST00000579466	ACE2	Q9BYF1	805 aa	Predicted RBP	10.02	□□□□□ -0.81
MSI2-208	ENST00000579466	PCED1A	Q9H1Q7	454 aa		10.02	□□□□□ -0.81
MSI2-208	ENST00000579466	SCUBE2	Q9NQ36	999 aa		10.02	□□□□□ -0.81
MSI2-208	ENST00000579466	AASDHPPT	Q9NRN7	309 aa		10.02	□□□□□ -0.81
MSI2-208	ENST00000579466	OLA1	Q9NTK5	396 aa	Known RBP	10.02	□□□□□ -0.81
MSI2-208	ENST00000579466	FBXL12	Q9NXK8	326 aa		10.02	□□□□□ -0.81
MSI2-208	ENST00000579466	HESX1	Q9UBX0	185 aa		10.02	□□□□□ -0.81
MSI2-208	ENST00000579466	HBS1L	Q9Y450	684 aa	Known RBP	10.02	□□□□□ -0.81
MSI2-208	ENST00000579466	KNTC1	P50748	2209 aa		10.02	□□□□□ -0.81
MSI2-208	ENST00000579466	HELZ2	Q9BYK8	2649 aa	Known RBP	10.02	□□□□□ -0.81
MSI2-208	ENST00000579466	XPO1	O14980	1071 aa	Known RBP	10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	MAPK13	O15264	365 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	MID1	O15344	667 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	SIN3B	O75182	1162 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	RNASEH2A	O75792	299 aa	Known RBP	10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	DKK1	O94907	266 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	ATP5B	P06576	529 aa	Known RBP	10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	DLD	P09622	509 aa	Known RBP	10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	JUP	P14923	745 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	ABCB4	P21439	1286 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	RPL13	P26373	211 aa	Known RBP	10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	SLC6A4	P31645	630 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	CTSK	P43235	329 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	SYK	P43405	635 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	ST8SIA6	P61647	398 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	BST2	Q10589	180 aa	Known RBP	10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	SGO2	Q562F6	1265 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	ADGRF1	Q5T601	910 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	ARHGAP17	Q68EM7	881 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	NCEH1	Q6PIU2	408 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	MMS22L	Q6ZRQ5	1243 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	MFN1	Q8IWA4	741 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	CARNMT1	Q8N4J0	409 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	PDCD7	Q8N8D1	485 aa	Known RBP	10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	TMEM174	Q8WUU8	243 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	CNDP2	Q96KP4	475 aa	Known RBP	10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	ORAI3	Q9BRQ5	295 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	PABPC3	Q9H361	631 aa	Known RBP	10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	SGK2	Q9HBY8	427 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	RAB20	Q9NX57	234 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	CFAP45	Q9UL16	551 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	NCKAP1	Q9Y2A7	1128 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	CEP83	Q9Y592	693 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	DOCK9	Q9BZ29	2069 aa		10.01	□□□□□ -0.81
MSI2-208	ENST00000579466	COL5A1	P20908	1838 aa	Predicted RBP	10	□□□□□ -0.81
MSI2-208	ENST00000579466		A0A1B0GTQ1	180 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	ENC1	O14682	589 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	PCDHGA12	O60330	932 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	RHOBTB3	O94955	611 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	LDOC1	O95751	146 aa	Predicted RBP	10	□□□□□ -0.81
MSI2-208	ENST00000579466	MOCS2	O96007	188 aa	Predicted RBP	10	□□□□□ -0.81
MSI2-208	ENST00000579466	CALCA	P01258	141 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	WNT1	P04628	370 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	ITGAV	P06756	1048 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	CENPB	P07199	599 aa	Predicted RBP	10	□□□□□ -0.81
MSI2-208	ENST00000579466	EPB41	P11171	864 aa	Known RBP	10	□□□□□ -0.81
MSI2-208	ENST00000579466	CSK	P41240	450 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	CTSO	P43234	321 aa	Predicted RBP	10	□□□□□ -0.81
MSI2-208	ENST00000579466	PSMD8	P48556	350 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	NDUFA8	P51970	172 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	RACK1	P63244	317 aa	Known RBP	10	□□□□□ -0.81
MSI2-208	ENST00000579466	CUL2	Q13617	745 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	CDH18	Q13634	790 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	SMAD1	Q15797	465 aa	Known RBP	10	□□□□□ -0.81
MSI2-208	ENST00000579466	CBWD6	Q4V339	395 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	CBWD3	Q5JTY5	395 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	CBWD5	Q5RIA9	395 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	PM20D1	Q6GTS8	502 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	MMAA	Q8IVH4	418 aa	Known RBP	10	□□□□□ -0.81
MSI2-208	ENST00000579466	HSCB	Q8IWL3	235 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	EID2	Q8N6I1	236 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	10	□□□□□ -0.81
MSI2-208	ENST00000579466	CLEC4C	Q8WTT0	213 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	NXPE2	Q96DL1	559 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	MYEOV	Q96EZ4	313 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	SPATA32	Q96LK8	384 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	PRICKLE1	Q96MT3	831 aa	Predicted RBP	10	□□□□□ -0.81
MSI2-208	ENST00000579466	OMD	Q99983	421 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	FBRS	Q9HAH7	460 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	EBF2	Q9HAK2	575 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	OSGEP	Q9NPF4	335 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	ABCC13	Q9NSE7	274 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	DKK4	Q9UBT3	224 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	AK5	Q9Y6K8	562 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	PTPRQ	Q9UMZ3	2332 aa		10	□□□□□ -0.81
MSI2-208	ENST00000579466	FLNB	O75369	2602 aa	Known RBP	9.99	□□□□□ -0.81
MSI2-208	ENST00000579466		A0A087WV48	116 aa		9.99	□□□□□ -0.81
MSI2-208	ENST00000579466		A0A1W2PPC4	97 aa		9.99	□□□□□ -0.81
MSI2-208	ENST00000579466	TYW5	A2RUC4	315 aa	Known RBP	9.99	□□□□□ -0.81
MSI2-208	ENST00000579466	TTC34	A8MYJ7	566 aa		9.99	□□□□□ -0.81
MSI2-208	ENST00000579466		M0QYV0	167 aa		9.99	□□□□□ -0.81
MSI2-208	ENST00000579466	WNT9A	O14904	365 aa		9.99	□□□□□ -0.81
MSI2-208	ENST00000579466	TLX3	O43711	291 aa	Predicted RBP	9.99	□□□□□ -0.81
MSI2-208	ENST00000579466	ACSL4	O60488	711 aa		9.99	□□□□□ -0.81
MSI2-208	ENST00000579466	RNASEH1	O60930	286 aa	Known RBP	9.99	□□□□□ -0.81
MSI2-208	ENST00000579466	RFPL3	O75679	317 aa		9.99	□□□□□ -0.81
MSI2-208	ENST00000579466	GTF2H1	P32780	548 aa		9.99	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms