RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 PIGVQ9NUD9 493 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SFMBT1Q9UHJ3 866 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 JRKLQ9Y4A0 524 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PCDHA3Q9Y5H8 950 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 MYO16Q9Y6X6 1858 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SPDYE4A6NLX3 237 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 MIF4GDA9UHW6 222 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 KIF5CO60282 957 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ZNF500O60304 480 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SRFP11831 508 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PRLRP16471 622 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 MSNP26038 577 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CTNNA2P26232 953 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CCR1P32246 355 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SULT1E1P49888 294 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ZNF135P52742 658 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 MLLT6P55198 1093 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ETF1P62495 437 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CYP4F8P98187 520 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ATP11AP98196 1134 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 HADHQ16836 314 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ARTNQ5T4W7 220 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 GPR158Q5T848 1215 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 NUGGCQ68CJ6 796 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 DDX42Q86XP3 938 aaKnown RBP eCLIP11.55□□□□□ -0.561e-11■□□□□ 8.7
CDK5RAP3-204ENST00000577664 UNC45BQ8IWX7 931 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 NPAS3Q8IXF0 933 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 FAM217AQ8IXS0 508 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ARL14EPQ8N8R7 260 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 MAB21L3Q8N8X9 362 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 FGF13Q92913 245 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 E2F7Q96AV8 911 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ZSWIM3Q96MP5 696 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ALS2CR12Q96Q35 445 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 DCLK3Q9C098 648 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 OSBPL2Q9H1P3 480 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 RETREG1Q9H6L5 497 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 WDCPQ9H6R7 721 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 KIF9Q9HAQ2 790 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TDP1Q9NUW8 608 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 DDIT4Q9NX09 232 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 EPS15L1Q9UBC2 864 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CDH7Q9ULB5 785 aa11.55□□□□□ -0.56
CDK5RAP3-204ENST00000577664 DMXL2Q8TDJ6 3036 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 E2F8A0AVK6 867 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CCDC66A2RUB6 948 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ZNF487B1APH4 448 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 I6L893 689 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 GFRA2O00451 464 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PSTPIP1O43586 416 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 STC2O76061 302 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 KRT7P08729 469 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 GJA1P17302 382 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CEBPBP17676 345 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 IL1R2P27930 398 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CTNNA1P35221 906 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ARSEP51690 589 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 LIMK1P53667 647 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 NAP1L1P55209 391 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TBX4P57082 545 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 EFEMP1Q12805 493 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 C5orf22Q49AR2 442 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SOWAHCQ53LP3 525 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 RAB6CQ53S08 254 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 STXBP5Q5T5C0 1151 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ERMARDQ5T6L9 678 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 Q6ZNB5 142 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SND1Q7KZF4 910 aaKnown RBP eCLIP11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 RHOT1Q8IXI2 618 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 USP13Q92995 863 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 BTN2A3PQ96KV6 586 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ASB16Q96NS5 453 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TLR10Q9BXR5 811 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 RAB6CQ9H0N0 254 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 NUDT5Q9UKK9 219 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 AMFRQ9UKV5 643 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 FZD10Q9ULW2 581 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CA14Q9ULX7 337 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ZNF510Q9Y2H8 683 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ITPR1Q14643 2758 aa11.54□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SLC12A8A0AV02 714 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CYSRT1A8MQ03 144 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 KIF2AO00139 706 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 DDX3YO15523 660 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 LAMTOR5O43504 91 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PRPSAP2O60256 369 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 FOXD2O60548 495 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 KLKB1P03952 638 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 MBL2P11226 248 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 LAMP2P13473 410 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 HTR7P34969 479 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 AVPR1AP37288 418 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 HCAR3P49019 387 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 STARD6P59095 220 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TAS2R40P59535 323 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SPEM2Q0P670 501 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SEMA3BQ13214 749 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 NME3Q13232 169 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 DPYSL2Q16555 572 aa11.53□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TAZQ16635 292 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms