RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 MS4A13Q5J8X5 152 aa14.12□□□□□ -0.15
CCDC40-209ENST00000573474 ZNF697Q5TEC3 545 aa14.12□□□□□ -0.15
CCDC40-209ENST00000573474 RWDD4Q6NW29 188 aaKnown RBP14.12□□□□□ -0.15
CCDC40-209ENST00000573474 TMCO3Q6UWJ1 677 aa14.12□□□□□ -0.15
CCDC40-209ENST00000573474 C14orf80Q86SX3 495 aa14.12□□□□□ -0.15
CCDC40-209ENST00000573474 JAMLQ86YT9 394 aa14.12□□□□□ -0.15
CCDC40-209ENST00000573474 MAB21L3Q8N8X9 362 aa14.12□□□□□ -0.15
CCDC40-209ENST00000573474 SHKBP1Q8TBC3 707 aa14.12□□□□□ -0.15
CCDC40-209ENST00000573474 CCDC114Q96M63 670 aa14.12□□□□□ -0.15
CCDC40-209ENST00000573474 SLC22A12Q96S37 553 aa14.12□□□□□ -0.15
CCDC40-209ENST00000573474 CYP2S1Q96SQ9 504 aa14.12□□□□□ -0.15
CCDC40-209ENST00000573474 RAB17Q9H0T7 212 aa14.12□□□□□ -0.15
CCDC40-209ENST00000573474 ZNF576Q9H609 170 aa14.12□□□□□ -0.15
CCDC40-209ENST00000573474 NSUN3Q9H649 340 aaKnown RBP14.12□□□□□ -0.15
CCDC40-209ENST00000573474 CATSPERBQ9H7T0 1116 aa14.12□□□□□ -0.15
CCDC40-209ENST00000573474 SFXN1Q9H9B4 322 aa14.12□□□□□ -0.15
CCDC40-209ENST00000573474 PPARGC1AQ9UBK2 798 aaKnown RBP14.12□□□□□ -0.15
CCDC40-209ENST00000573474 DMGDHQ9UI17 866 aaKnown RBP14.12□□□□□ -0.15
CCDC40-209ENST00000573474 UTP11Q9Y3A2 253 aaKnown RBP14.12□□□□□ -0.15
CCDC40-209ENST00000573474 HEY1Q9Y5J3 304 aa14.12□□□□□ -0.15
CCDC40-209ENST00000573474 RAD54BQ9Y620 910 aa14.12□□□□□ -0.15
CCDC40-209ENST00000573474 A0A1W2PPC1 479 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 DRGXA6NNA5 263 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 H7C0C1 242 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 DYNC1I1O14576 645 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 MOSPD3O75425 235 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 LATS1O95835 1130 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 GAS8O95995 478 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 RBP3P10745 1247 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 GJA1P17302 382 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 TACR2P21452 398 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 CORO1AP31146 461 aaKnown RBP14.11□□□□□ -0.15
CCDC40-209ENST00000573474 GGCXP38435 758 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 CCR2P41597 374 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 ATP5OP48047 213 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 GUCY2DQ02846 1103 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 GBE1Q04446 702 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 SLC10A2Q12908 348 aaPredicted RBP14.11□□□□□ -0.15
CCDC40-209ENST00000573474 PPP1R7Q15435 360 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 ARTNQ5T4W7 220 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 GPR158Q5T848 1215 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 RAP1GAP2Q684P5 730 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 WDR93Q6P2C0 686 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 DARS2Q6PI48 645 aaKnown RBP14.11□□□□□ -0.15
CCDC40-209ENST00000573474 GSTA5Q7RTV2 222 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 GRASPQ7Z6J2 395 aaPredicted RBP14.11□□□□□ -0.15
CCDC40-209ENST00000573474 IFT20Q8IY31 132 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 ZNF683Q8IZ20 524 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 ALLCQ8N6M5 410 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 SMG7Q92540 1137 aaKnown RBP14.11□□□□□ -0.15
CCDC40-209ENST00000573474 TCEAL4Q96EI5 215 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 ZFRQ96KR1 1074 aaKnown RBP14.11□□□□□ -0.15
CCDC40-209ENST00000573474 PNKPQ96T60 521 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 PRMT1Q99873 361 aaKnown RBP14.11□□□□□ -0.15
CCDC40-209ENST00000573474 DDX50Q9BQ39 737 aaKnown RBP14.11□□□□□ -0.15
CCDC40-209ENST00000573474 ERP44Q9BS26 406 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 SLC46A2Q9BY10 475 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 IGFLR1Q9H665 355 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 TASP1Q9H6P5 420 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 PIDD1Q9HB75 910 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 EPB41L5Q9HCM4 733 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 SMPD4Q9NXE4 827 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 DONSONQ9NYP3 566 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 DTLQ9NZJ0 730 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 LMCD1Q9NZU5 365 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 ZMYM5Q9UJ78 669 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 RAB21Q9UL25 225 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 NEU3Q9UQ49 428 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 MFHAS1Q9Y4C4 1052 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 CPQQ9Y646 472 aa14.11□□□□□ -0.15
CCDC40-209ENST00000573474 MYO7AQ13402 2215 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 IGLV3-10A0A075B6K4 115 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 WASH4PA8MWX3 477 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 HACD1B0YJ81 288 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 BHMG1C9JSJ3 638 aaPredicted RBP14.1□□□□□ -0.15
CCDC40-209ENST00000573474 KLKB1P03952 638 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 CKMP06732 381 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 IRF1P10914 325 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 RHOQP17081 205 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 STIP1P31948 543 aaKnown RBP14.1□□□□□ -0.15
CCDC40-209ENST00000573474 SERPINB6P35237 376 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 RBM10P98175 930 aaKnown RBP14.1□□□□□ -0.15
CCDC40-209ENST00000573474 PDK1Q15118 436 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 TEAD2Q15562 447 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 LRIT3Q3SXY7 679 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 PRSS36Q5K4E3 855 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 NADSYN1Q6IA69 706 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 FBXL22Q6P050 247 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 TMEM184AQ6ZMB5 413 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 ZC3H18Q86VM9 953 aaKnown RBP14.1□□□□□ -0.15
CCDC40-209ENST00000573474 CHSY1Q86X52 802 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 DENND1CQ8IV53 801 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 CDKL3Q8IVW4 592 aaPredicted RBP14.1□□□□□ -0.15
CCDC40-209ENST00000573474 LZTR1Q8N653 840 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 EFHBQ8N7U6 833 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 C12orf76Q8N812 135 aaPredicted RBP14.1□□□□□ -0.15
CCDC40-209ENST00000573474 VN1R2Q8NFZ6 395 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 RSAD2Q8WXG1 361 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 TRIM51Q9BSJ1 452 aa14.1□□□□□ -0.15
CCDC40-209ENST00000573474 ZYG11BQ9C0D3 744 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms