RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 ZNF557Q8N988 423 aaPredicted RBP17.86■□□□□ 0.45
LITAF-212ENST00000573332 CCDC26Q8TAB7 109 aa17.86■□□□□ 0.45
LITAF-212ENST00000573332 EZH1Q92800 747 aaPredicted RBP17.86■□□□□ 0.45
LITAF-212ENST00000573332 IER2Q9BTL4 223 aa17.86■□□□□ 0.45
LITAF-212ENST00000573332 NUP85Q9BW27 656 aa17.86■□□□□ 0.45
LITAF-212ENST00000573332 PACSIN1Q9BY11 444 aa17.86■□□□□ 0.45
LITAF-212ENST00000573332 TRIM7Q9C029 511 aa17.86■□□□□ 0.45
LITAF-212ENST00000573332 RAB6CQ9H0N0 254 aa17.86■□□□□ 0.45
LITAF-212ENST00000573332 ARHGEF4Q9NR80 690 aa17.86■□□□□ 0.45
LITAF-212ENST00000573332 DNAJC17Q9NVM6 304 aaKnown RBP17.86■□□□□ 0.45
LITAF-212ENST00000573332 UVRAGQ9P2Y5 699 aa17.86■□□□□ 0.45
LITAF-212ENST00000573332 TYW5A2RUC4 315 aaKnown RBP17.85■□□□□ 0.45
LITAF-212ENST00000573332 EIF3CLB5ME19 914 aaKnown RBP17.85■□□□□ 0.45
LITAF-212ENST00000573332 KAT7O95251 611 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 APODP05090 189 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 TNFRSF4P43489 277 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 DGKGP49619 791 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 SGSHP51688 502 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 NRG1Q02297 640 aaPredicted RBP17.85■□□□□ 0.45
LITAF-212ENST00000573332 MESP2Q0VG99 397 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 SCAPQ12770 1279 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 AUHQ13825 339 aaKnown RBP17.85■□□□□ 0.45
LITAF-212ENST00000573332 TCEAL1Q15170 157 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 TTC39BQ5VTQ0 682 aaPredicted RBP17.85■□□□□ 0.45
LITAF-212ENST00000573332 GRAMD4Q6IC98 578 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 FBXL22Q6P050 247 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 MAMSTRQ6ZN01 415 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 NUDT18Q6ZVK8 323 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 TMEM139Q8IV31 216 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 ZNF683Q8IZ20 524 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 LGI2Q8N0V4 545 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 NIPA2Q8N8Q9 360 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 TERB1Q8NA31 727 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 BHMTQ93088 406 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 MYEOVQ96EZ4 313 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 EIF3CQ99613 913 aaKnown RBP17.85■□□□□ 0.45
LITAF-212ENST00000573332 BAG1Q99933 345 aaPredicted RBP17.85■□□□□ 0.45
LITAF-212ENST00000573332 OSBPL2Q9H1P3 480 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 CHRDQ9H2X0 955 aa17.85■□□□□ 0.45
LITAF-212ENST00000573332 EPN1Q9Y6I3 576 aaPredicted RBP17.85■□□□□ 0.45
LITAF-212ENST00000573332 IGLV3-10A0A075B6K4 115 aa17.84■□□□□ 0.45
LITAF-212ENST00000573332 K7EQS6 105 aa17.84■□□□□ 0.45
LITAF-212ENST00000573332 TBL1XO60907 577 aa17.84■□□□□ 0.45
LITAF-212ENST00000573332 RNF8O76064 485 aa17.84■□□□□ 0.45
LITAF-212ENST00000573332 NDUFA10O95299 355 aa17.84■□□□□ 0.45
LITAF-212ENST00000573332 EGFP01133 1207 aa17.84■□□□□ 0.45
LITAF-212ENST00000573332 DCNP07585 359 aaKnown RBP17.84■□□□□ 0.45
LITAF-212ENST00000573332 MRE11P49959 708 aa17.84■□□□□ 0.45
LITAF-212ENST00000573332 RPS24P62847 133 aaKnown RBP17.84■□□□□ 0.45
LITAF-212ENST00000573332 PIGHQ14442 188 aaPredicted RBP17.84■□□□□ 0.45
LITAF-212ENST00000573332 RABGAP1LQ5R372 815 aa17.84■□□□□ 0.45
LITAF-212ENST00000573332 ARTNQ5T4W7 220 aa17.84■□□□□ 0.45
LITAF-212ENST00000573332 KIAA0907Q7Z7F0 614 aaPredicted RBP17.84■□□□□ 0.45
LITAF-212ENST00000573332 ARFGAP1Q8N6T3 406 aa17.84■□□□□ 0.45
LITAF-212ENST00000573332 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.84■□□□□ 0.45
LITAF-212ENST00000573332 SIK2Q9H0K1 926 aa17.84■□□□□ 0.45
LITAF-212ENST00000573332 IP6K2Q9UHH9 426 aa17.84■□□□□ 0.45
LITAF-212ENST00000573332 LCMT1Q9UIC8 334 aa17.84■□□□□ 0.45
LITAF-212ENST00000573332 CLEC4EQ9ULY5 219 aa17.84■□□□□ 0.45
LITAF-212ENST00000573332 SOWAHDA6NJG2 315 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 DRGXA6NNA5 263 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 MYO1FO00160 1098 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 TRIM24O15164 1050 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 MTA2O94776 668 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 PCK1P35558 622 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 MAGEA1P43355 309 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 SPA17Q15506 151 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 SLFN11Q7Z7L1 901 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 C14orf80Q86SX3 495 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 RHOT2Q8IXI1 618 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 FIBINQ8TAL6 211 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 ZNF564Q8TBZ8 553 aaPredicted RBP17.83■□□□□ 0.44
LITAF-212ENST00000573332 KCNV2Q8TDN2 545 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 IGSF8Q969P0 613 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 LUC7LQ9NQ29 371 aaKnown RBP17.83■□□□□ 0.44
LITAF-212ENST00000573332 TMPRSS4Q9NRS4 437 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 RBM12Q9NTZ6 932 aaKnown RBP17.83■□□□□ 0.44
LITAF-212ENST00000573332 CTTNBP2NLQ9P2B4 639 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 ANAPC7Q9UJX3 599 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 VANGL2Q9ULK5 521 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 STARD13Q9Y3M8 1113 aa17.83■□□□□ 0.44
LITAF-212ENST00000573332 A0A1B0GVM2 712 aa17.82■□□□□ 0.44
LITAF-212ENST00000573332 TBC1D3BA6NDS4 549 aa17.82■□□□□ 0.44
LITAF-212ENST00000573332 TCAF2A6NFQ2 919 aa17.82■□□□□ 0.44
LITAF-212ENST00000573332 CHURC1-FNTBB4DL54 471 aa17.82■□□□□ 0.44
LITAF-212ENST00000573332 LRCH4O75427 683 aa17.82■□□□□ 0.44
LITAF-212ENST00000573332 LUC7L3O95232 432 aaKnown RBP17.82■□□□□ 0.44
LITAF-212ENST00000573332 CHRM1P11229 460 aaPredicted RBP17.82■□□□□ 0.44
LITAF-212ENST00000573332 KDSRQ06136 332 aa17.82■□□□□ 0.44
LITAF-212ENST00000573332 MANEALQ5VSG8 457 aa17.82■□□□□ 0.44
LITAF-212ENST00000573332 SCYL2Q6P3W7 929 aa17.82■□□□□ 0.44
LITAF-212ENST00000573332 LRRC31Q6UY01 552 aa17.82■□□□□ 0.44
LITAF-212ENST00000573332 RAD9BQ6WBX8 426 aa17.82■□□□□ 0.44
LITAF-212ENST00000573332 CHST9Q7L1S5 443 aa17.82■□□□□ 0.44
LITAF-212ENST00000573332 CFAP52Q8N1V2 620 aa17.82■□□□□ 0.44
LITAF-212ENST00000573332 CCDC185Q8N715 623 aa17.82■□□□□ 0.44
LITAF-212ENST00000573332 RFFLQ8WZ73 363 aa17.82■□□□□ 0.44
LITAF-212ENST00000573332 LMLNQ96KR4 655 aa17.82■□□□□ 0.44
LITAF-212ENST00000573332 RPRD1AQ96P16 312 aaPredicted RBP17.82■□□□□ 0.44
LITAF-212ENST00000573332 RETREG1Q9H6L5 497 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms