RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 HIC1Q14526 733 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 EFHC1Q5JVL4 640 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 PRAMEF19Q5SWL8 479 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 LRRC8BQ6P9F7 803 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 HFE2Q6ZVN8 426 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 MARK2Q7KZI7 788 aaKnown RBP11.54□□□□□ -0.56
RPAIN-212ENST00000573126 ARCQ7LC44 396 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 ZNF567Q8N184 647 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 SH3TC2Q8TF17 1288 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 CDKL2Q92772 493 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 MAML3Q96JK9 1138 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 ZNF778Q96MU6 729 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 ZFATQ9P243 1243 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 FAM72CH0Y354 149 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 STK10O94804 968 aaKnown RBP11.53□□□□□ -0.56
RPAIN-212ENST00000573126 PSMG1O95456 288 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 CD4P01730 458 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 ATP6V1C1P21283 382 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 RPL34P49207 117 aaKnown RBP11.53□□□□□ -0.56
RPAIN-212ENST00000573126 TAF6P49848 677 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 WASHC5Q12768 1159 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 BLMHQ13867 455 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 FAM72AQ5TYM5 149 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 STEAP4Q687X5 459 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 MBLAC2Q68D91 279 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 FAM72DQ6L9T8 149 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 KYAT3Q6YP21 454 aaKnown RBP11.53□□□□□ -0.56
RPAIN-212ENST00000573126 TIFABQ6ZNK6 161 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 PID1Q7Z2X4 250 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 CTU1Q7Z7A3 348 aaKnown RBP11.53□□□□□ -0.56
RPAIN-212ENST00000573126 OSTM1Q86WC4 334 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 FAM72BQ86X60 149 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 RNF169Q8NCN4 708 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 ZNF560Q96MR9 790 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 OSBPL1AQ9BXW6 950 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 MMADHCQ9H3L0 296 aaPredicted RBP11.53□□□□□ -0.56
RPAIN-212ENST00000573126 PIGVQ9NUD9 493 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 ZNF358Q9NW07 568 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 DNAJC16Q9Y2G8 782 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 RPS6KL1Q9Y6S9 549 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 MEI4A8MW99 385 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 HACD1B0YJ81 288 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 BTBD19C9JJ37 291 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 XPO1O14980 1071 aaKnown RBP11.53□□□□□ -0.56
RPAIN-212ENST00000573126 NVLO15381 856 aaKnown RBP11.53□□□□□ -0.56
RPAIN-212ENST00000573126 OPHN1O60890 802 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 FGF3P11487 239 aaPredicted RBP11.53□□□□□ -0.56
RPAIN-212ENST00000573126 PGAM1P18669 254 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 SCNN1AP37088 669 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 LILRA4P59901 499 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 MXRA7P84157 204 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 TSNAXIP1Q2TAA8 658 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 FAM91A1Q658Y4 838 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 ANO7Q6IWH7 933 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 ATG14Q6ZNE5 492 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 GPR142Q7Z601 462 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 CMC1Q7Z7K0 106 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 RASSF3Q86WH2 238 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 TMPRSS6Q8IU80 811 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 ARRDC4Q8NCT1 418 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 SPDL1Q96EA4 605 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 TNIP3Q96KP6 325 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 THTPAQ9BU02 230 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 GDAP2Q9NXN4 497 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 TXNDC16Q9P2K2 825 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 WASF2Q9Y6W5 498 aa11.53□□□□□ -0.56
RPAIN-212ENST00000573126 PLIN3O60664 434 aa11.52□□□□□ -0.56
RPAIN-212ENST00000573126 SMNDC1O75940 238 aaKnown RBP eCLIP11.52□□□□□ -0.56
RPAIN-212ENST00000573126 AMHP03971 560 aa11.52□□□□□ -0.56
RPAIN-212ENST00000573126 MLNP12872 115 aa11.52□□□□□ -0.56
RPAIN-212ENST00000573126 YY1P25490 414 aa11.52□□□□□ -0.56
RPAIN-212ENST00000573126 CNTFP26441 200 aa11.52□□□□□ -0.56
RPAIN-212ENST00000573126 ABCG1P45844 678 aa11.52□□□□□ -0.56
RPAIN-212ENST00000573126 SNX17Q15036 470 aa11.52□□□□□ -0.56
RPAIN-212ENST00000573126 C10orf107Q8IVU9 208 aa11.52□□□□□ -0.56
RPAIN-212ENST00000573126 WDR75Q8IWA0 830 aaKnown RBP11.52□□□□□ -0.56
RPAIN-212ENST00000573126 HACE1Q8IYU2 909 aa11.52□□□□□ -0.56
RPAIN-212ENST00000573126 OR52K1Q8NGK4 314 aa11.52□□□□□ -0.56
RPAIN-212ENST00000573126 PIWIL2Q8TC59 973 aaKnown RBP11.52□□□□□ -0.56
RPAIN-212ENST00000573126 ATP2A3Q93084 1043 aa11.52□□□□□ -0.56
RPAIN-212ENST00000573126 ZFP42Q96MM3 310 aa11.52□□□□□ -0.56
RPAIN-212ENST00000573126 ANKRD27Q96NW4 1050 aa11.52□□□□□ -0.56
RPAIN-212ENST00000573126 TINF2Q9BSI4 451 aa11.52□□□□□ -0.56
RPAIN-212ENST00000573126 CCDC106Q9BWC9 280 aa11.52□□□□□ -0.56
RPAIN-212ENST00000573126 TAGLN3Q9UI15 199 aa11.52□□□□□ -0.56
RPAIN-212ENST00000573126 RRN3P2A6NIE6 340 aa11.52□□□□□ -0.57
RPAIN-212ENST00000573126 SPECC1L-ADORA2AF8WAN1 911 aa11.52□□□□□ -0.57
RPAIN-212ENST00000573126 EEF2KO00418 725 aaKnown RBP11.52□□□□□ -0.57
RPAIN-212ENST00000573126 STRNO43815 780 aa11.52□□□□□ -0.57
RPAIN-212ENST00000573126 GLRA3O75311 464 aa11.52□□□□□ -0.57
RPAIN-212ENST00000573126 SERPINA6P08185 405 aa11.52□□□□□ -0.57
RPAIN-212ENST00000573126 HOXD8P13378 290 aaPredicted RBP11.52□□□□□ -0.57
RPAIN-212ENST00000573126 NPR3P17342 541 aa11.52□□□□□ -0.57
RPAIN-212ENST00000573126 TYK2P29597 1187 aa11.52□□□□□ -0.57
RPAIN-212ENST00000573126 ARRB2P32121 409 aa11.52□□□□□ -0.57
RPAIN-212ENST00000573126 VHLP40337 213 aa11.52□□□□□ -0.57
RPAIN-212ENST00000573126 SLC1A6P48664 564 aa11.52□□□□□ -0.57
RPAIN-212ENST00000573126 MAP3K7CLP57077 242 aa11.52□□□□□ -0.57
RPAIN-212ENST00000573126 PCLAFQ15004 111 aa11.52□□□□□ -0.57
RPAIN-212ENST00000573126 PDK1Q15118 436 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms