RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 A0A087X0T9 212 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 CCP110O43303 1012 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 FAM228BP0C875 321 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 MYBL1P10243 752 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 PSMA2P25787 234 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 WASP42768 502 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 TNFRSF4P43489 277 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 CXCR3P49682 368 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 RPL7AP62424 266 aaKnown RBP13.25□□□□□ -0.29
CDT1-203ENST00000569140 GFPT1Q06210 699 aaPredicted RBP13.25□□□□□ -0.29
CDT1-203ENST00000569140 TCF15Q12870 199 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 MTA1Q13330 715 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 GEN1Q17RS7 908 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 ARL13BQ3SXY8 428 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 RAB6CQ53S08 254 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 TXNDC5Q8NBS9 432 aaKnown RBP13.25□□□□□ -0.29
CDT1-203ENST00000569140 USP33Q8TEY7 942 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 UCMAQ8WVF2 138 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 NT5C3BQ969T7 300 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 PGAP3Q96FM1 320 aaPredicted RBP13.25□□□□□ -0.29
CDT1-203ENST00000569140 HHIPQ96QV1 700 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 RAB6CQ9H0N0 254 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 ABCB8Q9NUT2 735 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 C2orf42Q9NWW7 574 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 ARHGEF38Q9NXL2 777 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 SCINQ9Y6U3 715 aa13.25□□□□□ -0.29
CDT1-203ENST00000569140 PRRT4C9JH25 899 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 SRGAP2O75044 1071 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 LUC7L3O95232 432 aaKnown RBP13.24□□□□□ -0.29
CDT1-203ENST00000569140 CISD3P0C7P0 127 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 SP9P0CG40 484 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 PABPC1P11940 636 aaKnown RBP13.24□□□□□ -0.29
CDT1-203ENST00000569140 PTPN9P43378 593 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 NUMBP49757 651 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 ZNF143P52747 638 aaPredicted RBP13.24□□□□□ -0.29
CDT1-203ENST00000569140 MRPS21P82921 87 aaKnown RBP13.24□□□□□ -0.29
CDT1-203ENST00000569140 MAMLD1Q13495 774 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 EIF4EBP2Q13542 120 aaPredicted RBP13.24□□□□□ -0.29
CDT1-203ENST00000569140 AUHQ13825 339 aaKnown RBP13.24□□□□□ -0.29
CDT1-203ENST00000569140 DMC1Q14565 340 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 TTC39BQ5VTQ0 682 aaPredicted RBP13.24□□□□□ -0.29
CDT1-203ENST00000569140 EGFLAMQ63HQ2 1017 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 SDE2Q6IQ49 451 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 FBXL22Q6P050 247 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 ALKBH5Q6P6C2 394 aaKnown RBP13.24□□□□□ -0.29
CDT1-203ENST00000569140 LRRC31Q6UY01 552 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 CHST9Q7L1S5 443 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 TRMT11Q7Z4G4 463 aaKnown RBP13.24□□□□□ -0.29
CDT1-203ENST00000569140 CHPFQ8IZ52 775 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 WFDC5Q8TCV5 224 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 MRFAP1L1Q96HT8 127 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 CCDC42Q96M95 316 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 SLC2A11Q9BYW1 496 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 THAP2Q9H0W7 228 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 IRF2BPLQ9H1B7 796 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 MRPL47Q9HD33 250 aaKnown RBP13.24□□□□□ -0.29
CDT1-203ENST00000569140 PRMT8Q9NR22 394 aaPredicted RBP13.24□□□□□ -0.29
CDT1-203ENST00000569140 GGA2Q9UJY4 613 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 FBXO4Q9UKT5 387 aa13.24□□□□□ -0.29
CDT1-203ENST00000569140 TCRBV5S1A1TA0A578 114 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 HLA-FP30511 346 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 HNRNPH3P31942 346 aaKnown RBP13.23□□□□□ -0.29
CDT1-203ENST00000569140 CD70P32970 193 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 PXNP49023 591 aaPredicted RBP13.23□□□□□ -0.29
CDT1-203ENST00000569140 TBX2Q13207 712 aaPredicted RBP13.23□□□□□ -0.29
CDT1-203ENST00000569140 FNDC3BQ53EP0 1204 aaKnown RBP13.23□□□□□ -0.29
CDT1-203ENST00000569140 EOGTQ5NDL2 527 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 MPP7Q5T2T1 576 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 PLEKHA7Q6IQ23 1121 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 STRADAQ7RTN6 431 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 MAML2Q8IZL2 1156 aaPredicted RBP13.23□□□□□ -0.29
CDT1-203ENST00000569140 AHI1Q8N157 1196 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 CCDC185Q8N715 623 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 ZNF557Q8N988 423 aaPredicted RBP13.23□□□□□ -0.29
CDT1-203ENST00000569140 TSTD1Q8NFU3 115 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 WFIKKN2Q8TEU8 576 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 SORCS1Q8WY21 1168 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 IGSF8Q969P0 613 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 CHP1Q99653 195 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 PRMT1Q99873 361 aaKnown RBP13.23□□□□□ -0.29
CDT1-203ENST00000569140 CNPY3Q9BT09 278 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 IRX2Q9BZI1 471 aaPredicted RBP13.23□□□□□ -0.29
CDT1-203ENST00000569140 ISCUQ9H1K1 167 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 NHEJ1Q9H9Q4 299 aaPredicted RBP13.23□□□□□ -0.29
CDT1-203ENST00000569140 ANLNQ9NQW6 1124 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 TMEM51Q9NW97 253 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 BCCIPQ9P287 314 aaKnown RBP eCLIP13.23□□□□□ -0.29
CDT1-203ENST00000569140 MMP17Q9ULZ9 603 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 SLC27A6Q9Y2P4 619 aa13.23□□□□□ -0.29
CDT1-203ENST00000569140 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.22□□□□□ -0.29
CDT1-203ENST00000569140 A0A1B0GVM2 712 aa13.22□□□□□ -0.29
CDT1-203ENST00000569140 SSU72P8A0A1W2PR75 194 aa13.22□□□□□ -0.29
CDT1-203ENST00000569140 TCAF2A6NFQ2 919 aa13.22□□□□□ -0.29
CDT1-203ENST00000569140 CHURC1-FNTBB4DL54 471 aa13.22□□□□□ -0.29
CDT1-203ENST00000569140 E9PAM4 449 aa13.22□□□□□ -0.29
CDT1-203ENST00000569140 SGK1O00141 431 aa13.22□□□□□ -0.29
CDT1-203ENST00000569140 GFRA2O00451 464 aa13.22□□□□□ -0.29
CDT1-203ENST00000569140 MOCS3O95396 460 aa13.22□□□□□ -0.29
CDT1-203ENST00000569140 HOXB2P14652 356 aa13.22□□□□□ -0.29
CDT1-203ENST00000569140 POLR2EP19388 210 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms