RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 C12orf50Q8NA57 414 aaPredicted RBP21.03■□□□□ 0.96
CLK3-225ENST00000569063 ERLEC1Q96DZ1 483 aa21.03■□□□□ 0.96
CLK3-225ENST00000569063 RTKNQ9BST9 563 aa21.03■□□□□ 0.96
CLK3-225ENST00000569063 TMEM245Q9H330 911 aa21.03■□□□□ 0.96
CLK3-225ENST00000569063 DDIT4Q9NX09 232 aa21.03■□□□□ 0.96
CLK3-225ENST00000569063 STIM2Q9P246 746 aa21.03■□□□□ 0.96
CLK3-225ENST00000569063 SLC12A6Q9UHW9 1150 aa21.03■□□□□ 0.96
CLK3-225ENST00000569063 PLA2G4CQ9UP65 541 aa21.03■□□□□ 0.96
CLK3-225ENST00000569063 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.02■□□□□ 0.96
CLK3-225ENST00000569063 EPHB6O15197 1021 aa21.02■□□□□ 0.96
CLK3-225ENST00000569063 GDF9O60383 454 aa21.02■□□□□ 0.96
CLK3-225ENST00000569063 SYNCRIPO60506 623 aaKnown RBP21.02■□□□□ 0.96
CLK3-225ENST00000569063 CDK11BP21127 795 aaKnown RBP21.02■□□□□ 0.96
CLK3-225ENST00000569063 TACR2P21452 398 aa21.02■□□□□ 0.96
CLK3-225ENST00000569063 PRKCHP24723 683 aa21.02■□□□□ 0.96
CLK3-225ENST00000569063 CD70P32970 193 aa21.02■□□□□ 0.96
CLK3-225ENST00000569063 MATKP42679 507 aa21.02■□□□□ 0.96
CLK3-225ENST00000569063 DHPSP49366 369 aaPredicted RBP21.02■□□□□ 0.96
CLK3-225ENST00000569063 FOXK2Q01167 660 aa21.02■□□□□ 0.96
CLK3-225ENST00000569063 AASDHQ4L235 1098 aaPredicted RBP21.02■□□□□ 0.96
CLK3-225ENST00000569063 MBLAC2Q68D91 279 aa21.02■□□□□ 0.96
CLK3-225ENST00000569063 SERPINA13PQ6UXR4 307 aa21.02■□□□□ 0.96
CLK3-225ENST00000569063 APTXQ7Z2E3 356 aaKnown RBP21.02■□□□□ 0.96
CLK3-225ENST00000569063 DGLUCYQ7Z3D6 616 aa21.02■□□□□ 0.96
CLK3-225ENST00000569063 ERICH1Q86X53 443 aa21.02■□□□□ 0.96
CLK3-225ENST00000569063 ZNF677Q86XU0 584 aa21.02■□□□□ 0.96
CLK3-225ENST00000569063 TMEFF1Q8IYR6 380 aa21.02■□□□□ 0.96
CLK3-225ENST00000569063 C18orf8Q96DM3 657 aa21.02■□□□□ 0.96
CLK3-225ENST00000569063 NAT10Q9H0A0 1025 aaKnown RBP21.02■□□□□ 0.96
CLK3-225ENST00000569063 SLC6A17Q9H1V8 727 aa21.02■□□□□ 0.96
CLK3-225ENST00000569063 RRN3Q9NYV6 651 aa21.02■□□□□ 0.96
CLK3-225ENST00000569063 NOCTQ9UK39 431 aaKnown RBP21.02■□□□□ 0.96
CLK3-225ENST00000569063 SPTBN4Q9H254 2564 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 ABCA7Q8IZY2 2146 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 IGHV1OR15-9A0A0B4J2B8 117 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 SLC30A4O14863 429 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 AP5Z1O43299 807 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 GFPT2O94808 682 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 ATP5BP06576 529 aaKnown RBP21.01■□□□□ 0.95
CLK3-225ENST00000569063 MMEP08473 750 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 DLDP09622 509 aaKnown RBP21.01■□□□□ 0.95
CLK3-225ENST00000569063 ABCB4P21439 1286 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 SOX5P35711 763 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 LIMK1P53667 647 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 MTA1Q13330 715 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 SYCP1Q15431 976 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 PTPRNQ16849 979 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 RAP1GAP2Q684P5 730 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 CYP2U1Q7Z449 544 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 LGI2Q8N0V4 545 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 CFAP52Q8N1V2 620 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 CYB5D2Q8WUJ1 264 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 TTC17Q96AE7 1141 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 PRMT1Q99873 361 aaKnown RBP21.01■□□□□ 0.95
CLK3-225ENST00000569063 BPIFA3Q9BQP9 254 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 MKRN2Q9H000 416 aaKnown RBP21.01■□□□□ 0.95
CLK3-225ENST00000569063 SMOC1Q9H4F8 434 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 PRDM16Q9HAZ2 1276 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 NLRC4Q9NPP4 1024 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 THADAQ6YHU6 1953 aa21.01■□□□□ 0.95
CLK3-225ENST00000569063 SYNJ2BP-COX16A0A087WUM0 186 aa21■□□□□ 0.95
CLK3-225ENST00000569063 LUC7L3O95232 432 aaKnown RBP21■□□□□ 0.95
CLK3-225ENST00000569063 EPHX1P07099 455 aa21■□□□□ 0.95
CLK3-225ENST00000569063 POLR2EP19388 210 aaKnown RBP21■□□□□ 0.95
CLK3-225ENST00000569063 PTGER3P43115 390 aa21■□□□□ 0.95
CLK3-225ENST00000569063 CDR2Q01850 454 aa21■□□□□ 0.95
CLK3-225ENST00000569063 UBXN1Q04323 297 aa21■□□□□ 0.95
CLK3-225ENST00000569063 LMAN2Q12907 356 aa21■□□□□ 0.95
CLK3-225ENST00000569063 FNDC3BQ53EP0 1204 aaKnown RBP21■□□□□ 0.95
CLK3-225ENST00000569063 CHSY1Q86X52 802 aa21■□□□□ 0.95
CLK3-225ENST00000569063 XYLT1Q86Y38 959 aa21■□□□□ 0.95
CLK3-225ENST00000569063 TMPRSS6Q8IU80 811 aa21■□□□□ 0.95
CLK3-225ENST00000569063 CCDC117Q8IWD4 279 aaPredicted RBP21■□□□□ 0.95
CLK3-225ENST00000569063 CARNMT1Q8N4J0 409 aa21■□□□□ 0.95
CLK3-225ENST00000569063 AOPEPQ8N6M6 819 aa21■□□□□ 0.95
CLK3-225ENST00000569063 RNF34Q969K3 372 aa21■□□□□ 0.95
CLK3-225ENST00000569063 NT5C3BQ969T7 300 aa21■□□□□ 0.95
CLK3-225ENST00000569063 ERGIC2Q96RQ1 377 aa21■□□□□ 0.95
CLK3-225ENST00000569063 NPY6RQ99463 290 aa21■□□□□ 0.95
CLK3-225ENST00000569063 RXFP3Q9NSD7 469 aa21■□□□□ 0.95
CLK3-225ENST00000569063 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21■□□□□ 0.95
CLK3-225ENST00000569063 COX16Q9P0S2 106 aa21■□□□□ 0.95
CLK3-225ENST00000569063 CYP8B1Q9UNU6 501 aa21■□□□□ 0.95
CLK3-225ENST00000569063 DNAH14Q0VDD8 3507 aa20.99■□□□□ 0.95
CLK3-225ENST00000569063 F5H5T6 163 aa20.99■□□□□ 0.95
CLK3-225ENST00000569063 M0QYT0 321 aa20.99■□□□□ 0.95
CLK3-225ENST00000569063 C7P10643 843 aa20.99■□□□□ 0.95
CLK3-225ENST00000569063 STAT1P42224 750 aa20.99■□□□□ 0.95
CLK3-225ENST00000569063 DPP6P42658 865 aa20.99■□□□□ 0.95
CLK3-225ENST00000569063 COPAP53621 1224 aa20.99■□□□□ 0.95
CLK3-225ENST00000569063 NOMO3P69849 1222 aa20.99■□□□□ 0.95
CLK3-225ENST00000569063 RPL6Q02878 288 aaKnown RBP20.99■□□□□ 0.95
CLK3-225ENST00000569063 NME3Q13232 169 aa20.99■□□□□ 0.95
CLK3-225ENST00000569063 CAMK2GQ13555 558 aaPredicted RBP20.99■□□□□ 0.95
CLK3-225ENST00000569063 CDH18Q13634 790 aa20.99■□□□□ 0.95
CLK3-225ENST00000569063 ANO6Q4KMQ2 910 aa20.99■□□□□ 0.95
CLK3-225ENST00000569063 FSCBQ5H9T9 825 aa20.99■□□□□ 0.95
CLK3-225ENST00000569063 KIAA1324Q6UXG2 1013 aaKnown RBP20.99■□□□□ 0.95
CLK3-225ENST00000569063 MSANTD4Q8NCY6 345 aa20.99■□□□□ 0.95
CLK3-225ENST00000569063 NEK11Q8NG66 645 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms