RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 CFIP05156 583 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 NCAM1P13591 858 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 PRKCHP24723 683 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 GNA15P30679 374 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 PBX1P40424 430 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 SLC11A2P49281 568 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 NOVA1P51513 510 aaKnown RBP13.39□□□□□ -0.27
TSC2-220ENST00000568238 TBX4P57082 545 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 JAM2P57087 298 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 RING1Q06587 406 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 ZNF33AQ06730 810 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 ZNF234Q14588 700 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 MEA1Q16626 185 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 PSAPL1Q6NUJ1 521 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 SLC23A3Q6PIS1 610 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 SERPINA13PQ6UXR4 307 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 RABEPKQ7Z6M1 372 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 UNC45BQ8IWX7 931 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 FAM71AQ8IYT1 594 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 CEP76Q8TAP6 659 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 WFIKKN2Q8TEU8 576 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 SORCS1Q8WY21 1168 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 FAM149B1Q96BN6 582 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 TMA16Q96EY4 203 aaKnown RBP13.39□□□□□ -0.27
TSC2-220ENST00000568238 HSPA12BQ96MM6 686 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 TRIM5Q9C035 493 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 PRDM16Q9HAZ2 1276 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 DAAM1Q9Y4D1 1078 aa13.39□□□□□ -0.27
TSC2-220ENST00000568238 NYNRINQ9P2P1 1898 aaKnown RBP13.39□□□□□ -0.27
TSC2-220ENST00000568238 CDX4O14627 284 aaPredicted RBP13.38□□□□□ -0.27
TSC2-220ENST00000568238 IRAK2O43187 625 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 NDUFS2O75306 463 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 EPHX1P07099 455 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 ENGP17813 658 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 HLA-FP30511 346 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 GPD2P43304 727 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 ACADSBP45954 432 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 MAPK8P45983 427 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 RPL34P49207 117 aaKnown RBP13.38□□□□□ -0.27
TSC2-220ENST00000568238 SGSHP51688 502 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 NNTQ13423 1086 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 DUOXA1Q1HG43 343 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 FAM133BQ5BKY9 247 aaKnown RBP13.38□□□□□ -0.27
TSC2-220ENST00000568238 N4BP2L1Q5TBK1 243 aaPredicted RBP13.38□□□□□ -0.27
TSC2-220ENST00000568238 TMEM215Q68D42 235 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 DENND1BQ6P3S1 775 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 SARM1Q6SZW1 724 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 SLC47A2Q86VL8 602 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 AHI1Q8N157 1196 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 DQX1Q8TE96 717 aaKnown RBP13.38□□□□□ -0.27
TSC2-220ENST00000568238 CNTNAP3BQ96NU0 1288 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 SERPINB11Q96P15 392 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 TRIM62Q9BVG3 475 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 CNTNAP3Q9BZ76 1288 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 IRX2Q9BZI1 471 aaPredicted RBP13.38□□□□□ -0.27
TSC2-220ENST00000568238 MKRN2Q9H000 416 aaKnown RBP13.38□□□□□ -0.27
TSC2-220ENST00000568238 ABCB8Q9NUT2 735 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 USP36Q9P275 1121 aaKnown RBP13.38□□□□□ -0.27
TSC2-220ENST00000568238 GGA2Q9UJY4 613 aa13.38□□□□□ -0.27
TSC2-220ENST00000568238 TYW5A2RUC4 315 aaKnown RBP13.37□□□□□ -0.27
TSC2-220ENST00000568238 ACSL4O60488 711 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 TBL1XO60907 577 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 FYNP06241 537 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 PABPC1P11940 636 aaKnown RBP13.37□□□□□ -0.27
TSC2-220ENST00000568238 CD6P30203 668 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 CLCN1P35523 988 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 SOX5P35711 763 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 STAT1P42224 750 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 ATXN3P54252 364 aaPredicted RBP13.37□□□□□ -0.27
TSC2-220ENST00000568238 PTK2Q05397 1052 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 UAP1L1Q3KQV9 507 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 FNDC3BQ53EP0 1204 aaKnown RBP13.37□□□□□ -0.27
TSC2-220ENST00000568238 MPP7Q5T2T1 576 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 SH3PXD2AQ5TCZ1 1133 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 PIK3R6Q5UE93 754 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 RFWD3Q6PCD5 774 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 CHST9Q7L1S5 443 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 METTL3Q86U44 580 aaKnown RBP13.37□□□□□ -0.27
TSC2-220ENST00000568238 CACUL1Q86Y37 369 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 TMPRSS6Q8IU80 811 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 SLC41A1Q8IVJ1 513 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 SCUBE3Q8IX30 993 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.37□□□□□ -0.27
TSC2-220ENST00000568238 ZNF557Q8N988 423 aaPredicted RBP13.37□□□□□ -0.27
TSC2-220ENST00000568238 HJURPQ8NCD3 748 aaPredicted RBP13.37□□□□□ -0.27
TSC2-220ENST00000568238 STK32AQ8WU08 396 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 PRCCQ92733 491 aaPredicted RBP13.37□□□□□ -0.27
TSC2-220ENST00000568238 FOXJ1Q92949 421 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 SIPA1Q96FS4 1042 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 FCRL2Q96LA5 508 aaPredicted RBP13.37□□□□□ -0.27
TSC2-220ENST00000568238 DDX50Q9BQ39 737 aaKnown RBP13.37□□□□□ -0.27
TSC2-220ENST00000568238 TLR6Q9Y2C9 796 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 SPEGQ15772 3267 aa13.37□□□□□ -0.27
TSC2-220ENST00000568238 AKAP13Q12802 2813 aa13.36□□□□□ -0.27
TSC2-220ENST00000568238 NUMA1Q14980 2115 aa13.36□□□□□ -0.27
TSC2-220ENST00000568238 LRRC53A6NM62 1247 aa13.36□□□□□ -0.27
TSC2-220ENST00000568238 MEI4A8MW99 385 aa13.36□□□□□ -0.27
TSC2-220ENST00000568238 E5RJQ4 531 aa13.36□□□□□ -0.27
TSC2-220ENST00000568238 CAPN9O14815 690 aa13.36□□□□□ -0.27
TSC2-220ENST00000568238 SERPINF2P08697 491 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms