RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 ALDH1A2O94788 518 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 EPN2O95208 641 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 F9P00740 461 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 IGLV3-19P01714 112 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 APOEP02649 317 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 GABRG2P18507 467 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 CCR1P32246 355 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 IL12RB1P42701 662 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 PXNP49023 591 aaPredicted RBP8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 CENPCQ03188 943 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 CAMK2GQ13555 558 aaPredicted RBP8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 SLC12A1Q13621 1099 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 PTPRNQ16849 979 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 USP39Q53GS9 565 aaKnown RBP8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 BRMS1LQ5PSV4 323 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 KIAA1211LQ6NV74 962 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 RFWD3Q6PCD5 774 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 KBTBD6Q86V97 674 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 AHI1Q8N157 1196 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 ATP6V0D2Q8N8Y2 350 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 HJURPQ8NCD3 748 aaPredicted RBP8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 ADAM32Q8TC27 787 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 WFDC5Q8TCV5 224 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 IPO4Q8TEX9 1081 aaKnown RBP8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 UCMAQ8WVF2 138 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 CPA5Q8WXQ8 436 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 CENPIQ92674 756 aaPredicted RBP8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 MYO19Q96H55 970 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 SPAG5Q96R06 1193 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 PARD6AQ9NPB6 346 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 SLC12A6Q9UHW9 1150 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 XPO7Q9UIA9 1087 aaKnown RBP8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 GGA2Q9UJY4 613 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 INTS6Q9UL03 887 aaKnown RBP8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 STON1Q9Y6Q2 735 aa8.48□□□□□ -1.05
HDGFL3-205ENST00000568129 ADAMTS9Q9P2N4 1935 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 IGLV3-10A0A075B6K4 115 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 C2CD4BA6NLJ0 364 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 DRGXA6NNA5 263 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 C10orf142B7Z368 130 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 WASH3PC4AMC7 463 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 TSPAN3O60637 253 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 TBL1XO60907 577 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 GRAP2O75791 330 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 DLDP09622 509 aaKnown RBP8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 CCDC172P0C7W6 258 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 ZNF806P0C7X5 589 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 PABPC1P11940 636 aaKnown RBP8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 HOXB2P14652 356 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 FERP16591 822 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 TFE3P19532 575 aaPredicted RBP8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 TACR2P21452 398 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 FLT3P36888 993 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 PRKCIP41743 596 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 RPS24P62847 133 aaKnown RBP8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 NRG1Q02297 640 aaPredicted RBP8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 BYSLQ13895 437 aaKnown RBP8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 ZNF234Q14588 700 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 CSRP2Q16527 193 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 CLEC16AQ2KHT3 1053 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 FSCBQ5H9T9 825 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 TTC39BQ5VTQ0 682 aaPredicted RBP8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 TAF3Q5VWG9 929 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 PEAR1Q5VY43 1037 aaPredicted RBP8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 NAA35Q5VZE5 725 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 PMS2CLQ68D20 193 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 SDE2Q6IQ49 451 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 CHPFQ8IZ52 775 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 MSANTD4Q8NCY6 345 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 BHMTQ93088 406 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 ALG14Q96F25 216 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 VCPIP1Q96JH7 1222 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 MRGPRX1Q96LB2 322 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 HAPLN3Q96S86 360 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 AGPAT1Q99943 283 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 RETREG1Q9H6L5 497 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 CBX8Q9HC52 389 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 ZDHHC4Q9NPG8 344 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 ANLNQ9NQW6 1124 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 ITM2CQ9NQX7 267 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 PIGVQ9NUD9 493 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 DDIT4Q9NX09 232 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 DLL3Q9NYJ7 618 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 KIAA1522Q9P206 1035 aaPredicted RBP8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 MBD1Q9UIS9 605 aaPredicted RBP8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 GMEB2Q9UKD1 530 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 RAB23Q9ULC3 237 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 STAP1Q9ULZ2 295 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 TBC1D30Q9Y2I9 924 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 OR51B4Q9Y5P0 310 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 HS3ST4Q9Y661 456 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 ASCC3Q8N3C0 2202 aaKnown RBP8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 ITIH6Q6UXX5 1313 aa8.47□□□□□ -1.05
HDGFL3-205ENST00000568129 PCDH15Q96QU1 1955 aa8.46□□□□□ -1.05
HDGFL3-205ENST00000568129 TCRBV21S2A2A0A5A6 115 aa8.46□□□□□ -1.06
HDGFL3-205ENST00000568129 BCLAF3A2AJT9 711 aaKnown RBP8.46□□□□□ -1.06
HDGFL3-205ENST00000568129 SIGLEC16A6NMB1 481 aa8.46□□□□□ -1.06
HDGFL3-205ENST00000568129 M0QYT0 321 aa8.46□□□□□ -1.06
HDGFL3-205ENST00000568129 DCLK1O15075 740 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms