RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 ITPKAP23677 461 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 OXTRP30559 389 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 PTGER3P43115 390 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 SGSHP51688 502 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 RPS24P62847 133 aaKnown RBP7.17□□□□□ -1.26
SF3B3-209ENST00000567635 SLC6A3Q01959 620 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 RPL6Q02878 288 aaKnown RBP7.17□□□□□ -1.26
SF3B3-209ENST00000567635 RAPGEF1Q13905 1077 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 FNDC3BQ53EP0 1204 aaKnown RBP7.17□□□□□ -1.26
SF3B3-209ENST00000567635 ZC3H12AQ5D1E8 599 aaKnown RBP7.17□□□□□ -1.26
SF3B3-209ENST00000567635 MS4A13Q5J8X5 152 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 CDKAL1Q5VV42 579 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 LYSMD4Q5XG99 296 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 MBLAC2Q68D91 279 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 RNF43Q68DV7 783 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 OR6B2Q6IFH4 312 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 TCEAL6Q6IPX3 200 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 SERPINA13PQ6UXR4 307 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 RBM43Q6ZSC3 357 aaKnown RBP7.17□□□□□ -1.26
SF3B3-209ENST00000567635 ARMCX6Q7L4S7 300 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 TAC4Q86UU9 113 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 ADIPOR2Q86V24 386 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 TMPRSS6Q8IU80 811 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 SYT12Q8IV01 421 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 MFN1Q8IWA4 741 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 LGI2Q8N0V4 545 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 DEFB106AQ8N104 65 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 AHI1Q8N157 1196 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 CFAP52Q8N1V2 620 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 DEFB119Q8N690 84 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.17□□□□□ -1.26
SF3B3-209ENST00000567635 C1orf131Q8NDD1 294 aaKnown RBP7.17□□□□□ -1.26
SF3B3-209ENST00000567635 CEP76Q8TAP6 659 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 CYB5D2Q8WUJ1 264 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 PRCCQ92733 491 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-209ENST00000567635 TCEAL3Q969E4 200 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 RNF34Q969K3 372 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 TTC17Q96AE7 1141 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 SIPA1Q96FS4 1042 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 LMLNQ96KR4 655 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 BTN2A3PQ96KV6 586 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 SLC2A13Q96QE2 648 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 LSM14BQ9BX40 385 aaKnown RBP7.17□□□□□ -1.26
SF3B3-209ENST00000567635 NAA15Q9BXJ9 866 aaKnown RBP7.17□□□□□ -1.26
SF3B3-209ENST00000567635 NUSAP1Q9BXS6 441 aaKnown RBP7.17□□□□□ -1.26
SF3B3-209ENST00000567635 SLC6A17Q9H1V8 727 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 VPS16Q9H269 839 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 PDCL3Q9H2J4 239 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 SYNCQ9H7C4 482 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 PLCB1Q9NQ66 1216 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 RXFP3Q9NSD7 469 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 TMEM74BQ9NUR3 256 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 ANO10Q9NW15 660 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 FANCLQ9NW38 375 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 TJP2Q9UDY2 1190 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 SUN2Q9UH99 717 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 EVLQ9UI08 416 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-209ENST00000567635 PILRBQ9UKJ0 227 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 CYP8B1Q9UNU6 501 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 FHOD1Q9Y613 1164 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 ACACBO00763 2458 aa7.17□□□□□ -1.26
SF3B3-209ENST00000567635 GOLGA4Q13439 2230 aaKnown RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 KCNU1A8MYU2 1149 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 PATE3B3GLJ2 98 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 H0Y626 953 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 RIOK3O14730 519 aaKnown RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 HSF2BPO75031 334 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 GRAP2O75791 330 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 MBD3O95983 291 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 MOCS2O96007 188 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 IGLV3-25P01717 112 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 ERBB2P04626 1255 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 DLDP09622 509 aaKnown RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 PNMA6AP0CW24 399 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 ACADMP11310 421 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 CYP11B1P15538 503 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 ABCB4P21439 1286 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 TACR2P21452 398 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 PRKCHP24723 683 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 CD6P30203 668 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 CCR1P32246 355 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 CD70P32970 193 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 NOS2P35228 1153 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 HOXD12P35452 270 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 GABRB2P47870 512 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 RNASE9P60153 205 aaKnown RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 PITX1P78337 314 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 ZNF33AQ06730 810 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 MTA1Q13330 715 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 PDAP1Q13442 181 aaKnown RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 EIF4EBP2Q13542 120 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 CAMK2GQ13555 558 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-209ENST00000567635 KRT31Q15323 416 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 DUOXA1Q1HG43 343 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 TRIM61Q5EBN2 209 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 PPM1JQ5JR12 505 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 FKBP15Q5T1M5 1219 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 SYCP2LQ5T4T6 812 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 FAM183BPQ6ZVS7 135 aa7.16□□□□□ -1.26
SF3B3-209ENST00000567635 SLC26A9Q7LBE3 791 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms