RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 SIK2Q9H0K1 926 aa15.3■□□□□ 0.04
SPG7-213ENST00000566221 DUS2Q9NX74 493 aaKnown RBP15.3■□□□□ 0.04
SPG7-213ENST00000566221 IGSF9Q9P2J2 1179 aa15.3■□□□□ 0.04
SPG7-213ENST00000566221 OR12D3Q9UGF7 316 aa15.3■□□□□ 0.04
SPG7-213ENST00000566221 JRKLQ9Y4A0 524 aa15.3■□□□□ 0.04
SPG7-213ENST00000566221 PCDHA3Q9Y5H8 950 aa15.3■□□□□ 0.04
SPG7-213ENST00000566221 WNT6Q9Y6F9 365 aa15.3■□□□□ 0.04
SPG7-213ENST00000566221 SLC6A4P31645 630 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 L1CAMP32004 1257 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 MARCKSL1P49006 195 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 MLLT6P55198 1093 aaPredicted RBP15.29■□□□□ 0.04
SPG7-213ENST00000566221 SEMA3BQ13214 749 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 AUHQ13825 339 aaKnown RBP15.29■□□□□ 0.04
SPG7-213ENST00000566221 GRM2Q14416 872 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 KRT81Q14533 505 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 PDK2Q15119 407 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 PDGFRLQ15198 375 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 CA9Q16790 459 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 ODF2Q5BJF6 829 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 PPP6R3Q5H9R7 873 aaPredicted RBP15.29■□□□□ 0.04
SPG7-213ENST00000566221 RABGAP1LQ5R372 815 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 TTC39BQ5VTQ0 682 aaPredicted RBP15.29■□□□□ 0.04
SPG7-213ENST00000566221 LRRC31Q6UY01 552 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 MAP7D3Q8IWC1 876 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 PYROXD2Q8N2H3 581 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 KRT35Q92764 455 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 ATP2A3Q93084 1043 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 RBM41Q96IZ5 413 aaKnown RBP15.29■□□□□ 0.04
SPG7-213ENST00000566221 KCTD15Q96SI1 283 aaPredicted RBP15.29■□□□□ 0.04
SPG7-213ENST00000566221 PCDH18Q9HCL0 1135 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 KLHL11Q9NVR0 708 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 RCOR3Q9P2K3 495 aaPredicted RBP15.29■□□□□ 0.04
SPG7-213ENST00000566221 PACSIN2Q9UNF0 486 aaPredicted RBP15.29■□□□□ 0.04
SPG7-213ENST00000566221 NUP205Q92621 2012 aa15.29■□□□□ 0.04
SPG7-213ENST00000566221 TYW5A2RUC4 315 aaKnown RBP15.28■□□□□ 0.04
SPG7-213ENST00000566221 LRRD1A4D1F6 860 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 E9PAM4 449 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 H3BRJ5 948 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 CHADO15335 359 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 DDX3YO15523 660 aaKnown RBP15.28■□□□□ 0.04
SPG7-213ENST00000566221 NFATC1O95644 943 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 GGCXP38435 758 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 ARL4AP40617 200 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 CDH6P55285 790 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 RWDD2BP57060 319 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 ZP2Q05996 745 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 RPS6KA1Q15418 735 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 EML3Q32P44 896 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 ATP13A4Q4VNC1 1196 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 MANEALQ5VSG8 457 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 RFWD3Q6PCD5 774 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 VSIG1Q86XK7 387 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 LGI2Q8N0V4 545 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 KCTD6Q8NC69 237 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 HJURPQ8NCD3 748 aaPredicted RBP15.28■□□□□ 0.04
SPG7-213ENST00000566221 ST13P5Q8NFI4 369 aaPredicted RBP15.28■□□□□ 0.04
SPG7-213ENST00000566221 EXD1Q8NHP7 514 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 KIF18AQ8NI77 898 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 FAM71BQ8TC56 605 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 TBC1D31Q96DN5 1066 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 ASIC4Q96FT7 647 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 C16orf45Q96MC5 204 aaPredicted RBP15.28■□□□□ 0.04
SPG7-213ENST00000566221 PRICKLE1Q96MT3 831 aaPredicted RBP15.28■□□□□ 0.04
SPG7-213ENST00000566221 ZNF670Q9BS34 389 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 TRMT61BQ9BVS5 477 aaKnown RBP15.28■□□□□ 0.04
SPG7-213ENST00000566221 TLR10Q9BXR5 811 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 PLA2G2FQ9BZM2 168 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 LIMD1Q9UGP4 676 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 VANGL2Q9ULK5 521 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 SNX10Q9Y5X0 201 aa15.28■□□□□ 0.04
SPG7-213ENST00000566221 IGLV3-10A0A075B6K4 115 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 GOLGA6L7A0A1B0GV03 622 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 ZNF487B1APH4 448 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 FAM72CH0Y354 149 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 EEF2KO00418 725 aaKnown RBP15.27■□□□□ 0.04
SPG7-213ENST00000566221 GFRA2O00451 464 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 CREB3O43889 395 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 LRIG2O94898 1065 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 ADH1CP00326 375 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 CYBBP04839 570 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 KDELR1P24390 212 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 GDI1P31150 447 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 HOXC13P31276 330 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 PEX5P50542 639 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 DNA2P51530 1060 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 ARSEP51690 589 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 VCPP55072 806 aaKnown RBP15.27■□□□□ 0.04
SPG7-213ENST00000566221 TPI1P60174 286 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 C5orf22Q49AR2 442 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 MPPE1Q53F39 396 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 FAM72AQ5TYM5 149 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 FAM72DQ6L9T8 149 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 FBXL22Q6P050 247 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 FAM72BQ86X60 149 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 ZNF683Q8IZ20 524 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 CPA6Q8N4T0 437 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 RSAD2Q8WXG1 361 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 ALG3Q92685 438 aa15.27■□□□□ 0.04
SPG7-213ENST00000566221 RPRD1AQ96P16 312 aaPredicted RBP15.27■□□□□ 0.04
SPG7-213ENST00000566221 WDR24Q96S15 920 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms