RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 MYL5Q02045 173 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 ZNF252P-AS1Q0IIN9 211 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 LMAN2Q12907 356 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 FOXC1Q12948 553 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 PTPRNQ16849 979 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 C2CD6Q53TS8 623 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 EFHC1Q5JVL4 640 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 MPP7Q5T2T1 576 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 OTUD1Q5VV17 481 aaPredicted RBP13.15□□□□□ -0.3
HERC2-206ENST00000564519 RAP1GAP2Q684P5 730 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 MBLAC2Q68D91 279 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 KIAA1324Q6UXG2 1013 aaKnown RBP13.15□□□□□ -0.3
HERC2-206ENST00000564519 MMS22LQ6ZRQ5 1243 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 MFN1Q8IWA4 741 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 HJURPQ8NCD3 748 aaPredicted RBP13.15□□□□□ -0.3
HERC2-206ENST00000564519 NOX5Q96PH1 765 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 TRIM62Q9BVG3 475 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 ADAM33Q9BZ11 813 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 MKRN2Q9H000 416 aaKnown RBP13.15□□□□□ -0.3
HERC2-206ENST00000564519 PDCL3Q9H2J4 239 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 FAM204AQ9H8W3 233 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 FAM207AQ9NSI2 230 aaPredicted RBP13.15□□□□□ -0.3
HERC2-206ENST00000564519 LIMA1Q9UHB6 759 aaKnown RBP13.15□□□□□ -0.3
HERC2-206ENST00000564519 SIK3Q9Y2K2 1263 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 EPG5Q9HCE0 2579 aa13.15□□□□□ -0.3
HERC2-206ENST00000564519 ATXN2Q99700 1313 aaKnown RBP13.14□□□□□ -0.31
HERC2-206ENST00000564519 SPTBN2O15020 2390 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 ACACBO00763 2458 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 KCNU1A8MYU2 1149 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 TIMM44O43615 452 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 DAB1O75553 588 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 APOEP02649 317 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 PROS1P07225 676 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 MMEP08473 750 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 ZNF18P17022 549 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 TFE3P19532 575 aaPredicted RBP13.14□□□□□ -0.31
HERC2-206ENST00000564519 TACR2P21452 398 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 COPAP53621 1224 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 JAM2P57087 298 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 POLR2FP61218 127 aaKnown RBP13.14□□□□□ -0.31
HERC2-206ENST00000564519 CDK17Q00537 523 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 RPL6Q02878 288 aaKnown RBP13.14□□□□□ -0.31
HERC2-206ENST00000564519 TYRO3Q06418 890 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 BYSLQ13895 437 aaKnown RBP13.14□□□□□ -0.31
HERC2-206ENST00000564519 STARD3Q14849 445 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 UAP1L1Q3KQV9 507 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 FSCBQ5H9T9 825 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 SH3PXD2AQ5TCZ1 1133 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 SERPINA13PQ6UXR4 307 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 LPCAT2Q7L5N7 544 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 SLC26A9Q7LBE3 791 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 APTXQ7Z2E3 356 aaKnown RBP13.14□□□□□ -0.31
HERC2-206ENST00000564519 CHSY1Q86X52 802 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 CACUL1Q86Y37 369 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 LGI2Q8N0V4 545 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 AHI1Q8N157 1196 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 CARNMT1Q8N4J0 409 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 ZNF366Q8N895 744 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 TMEM35BQ8NCS4 154 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 EPS8L1Q8TE68 723 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 WFIKKN2Q8TEU8 576 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 SLC20A1Q8WUM9 679 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 PIGKQ92643 395 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 PRMT1Q99873 361 aaKnown RBP13.14□□□□□ -0.31
HERC2-206ENST00000564519 NUSAP1Q9BXS6 441 aaKnown RBP13.14□□□□□ -0.31
HERC2-206ENST00000564519 SYNCQ9H7C4 482 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 NLRC4Q9NPP4 1024 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 TMEM74BQ9NUR3 256 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 DDIT4Q9NX09 232 aa13.14□□□□□ -0.31
HERC2-206ENST00000564519 INTS6Q9UL03 887 aaKnown RBP13.14□□□□□ -0.31
HERC2-206ENST00000564519 TPRP12270 2363 aaKnown RBP13.13□□□□□ -0.31
HERC2-206ENST00000564519 LNP1A1A4G5 178 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 NPC1O15118 1278 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 ZBTB24O43167 697 aaPredicted RBP13.13□□□□□ -0.31
HERC2-206ENST00000564519 SYNCRIPO60506 623 aaKnown RBP13.13□□□□□ -0.31
HERC2-206ENST00000564519 GFPT2O94808 682 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 LUC7L3O95232 432 aaKnown RBP13.13□□□□□ -0.31
HERC2-206ENST00000564519 EPHX1P07099 455 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 ATP1A3P13637 1013 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 CHRNB2P17787 502 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 ITPKAP23677 461 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 RNASE9P60153 205 aaKnown RBP13.13□□□□□ -0.31
HERC2-206ENST00000564519 ARID5AQ03989 594 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 NME3Q13232 169 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 SYCP1Q15431 976 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 FKBP15Q5T1M5 1219 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 UNQ6494/PRO21346Q6UXR6 183 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 CIR1Q86X95 450 aaPredicted RBP13.13□□□□□ -0.31
HERC2-206ENST00000564519 XYLT1Q86Y38 959 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 TMPRSS6Q8IU80 811 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 SLC41A1Q8IVJ1 513 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 ZNF397Q8NF99 534 aaPredicted RBP13.13□□□□□ -0.31
HERC2-206ENST00000564519 FIBINQ8TAL6 211 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 CPA5Q8WXQ8 436 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 BTN2A3PQ96KV6 586 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 DDX50Q9BQ39 737 aaKnown RBP13.13□□□□□ -0.31
HERC2-206ENST00000564519 IRX2Q9BZI1 471 aaPredicted RBP13.13□□□□□ -0.31
HERC2-206ENST00000564519 TMEM245Q9H330 911 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 MTG2Q9H4K7 406 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 SLC32A1Q9H598 525 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms