RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 C1orf216Q8TAB5 229 aa17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 WFDC5Q8TCV5 224 aa17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 GTPBP2Q9BX10 602 aaKnown RBP17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 NAALADL1Q9UQQ1 740 aa17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 CACNA1EQ15878 2313 aa17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 GTPBP10A4D1E9 387 aaKnown RBP17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 PAPSS1O43252 624 aaPredicted RBP17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 IGLV3-25P01717 112 aa17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 KRT5P13647 590 aa17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 HLA-EP13747 358 aa17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 POLR2EP19388 210 aaKnown RBP17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 CD70P32970 193 aa17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 ARID5BQ14865 1188 aa17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 FNDC3BQ53EP0 1204 aaKnown RBP17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 MS4A13Q5J8X5 152 aa17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 IRF2BP1Q8IU81 584 aa17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 CYB5D2Q8WUJ1 264 aa17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 PRICKLE1Q96MT3 831 aaPredicted RBP17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 LHX5Q9H2C1 402 aa17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 PRSS16Q9NQE7 514 aa17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 ST7Q9NRC1 585 aa17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 SUN2Q9UH99 717 aa17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 CYTH4Q9UIA0 394 aa17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 USP24Q9UPU5 2620 aa17.87■□□□□ 0.45
VPS9D1-203ENST00000563798 PCNX2A6NKB5 2137 aa17.86■□□□□ 0.45
VPS9D1-203ENST00000563798 BECN2A8MW95 431 aa17.86■□□□□ 0.45
VPS9D1-203ENST00000563798 MEI4A8MW99 385 aa17.86■□□□□ 0.45
VPS9D1-203ENST00000563798 LETM1O95202 739 aaPredicted RBP17.86■□□□□ 0.45
VPS9D1-203ENST00000563798 MAOBP27338 520 aa17.86■□□□□ 0.45
VPS9D1-203ENST00000563798 DCAF12L1Q5VU92 463 aa17.86■□□□□ 0.45
VPS9D1-203ENST00000563798 SYPL2Q5VXT5 272 aa17.86■□□□□ 0.45
VPS9D1-203ENST00000563798 TAC4Q86UU9 113 aa17.86■□□□□ 0.45
VPS9D1-203ENST00000563798 MFN1Q8IWA4 741 aa17.86■□□□□ 0.45
VPS9D1-203ENST00000563798 SHC3Q92529 594 aa17.86■□□□□ 0.45
VPS9D1-203ENST00000563798 FAM149B1Q96BN6 582 aa17.86■□□□□ 0.45
VPS9D1-203ENST00000563798 MYO19Q96H55 970 aa17.86■□□□□ 0.45
VPS9D1-203ENST00000563798 THAP9Q9H5L6 903 aa17.86■□□□□ 0.45
VPS9D1-203ENST00000563798 POPDC2Q9HBU9 364 aa17.86■□□□□ 0.45
VPS9D1-203ENST00000563798 APEX2Q9UBZ4 518 aa17.86■□□□□ 0.45
VPS9D1-203ENST00000563798 TYW5A2RUC4 315 aaKnown RBP17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 E5RJQ4 531 aa17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 KRT37O76014 449 aa17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 ASLP04424 464 aa17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 PROS1P07225 676 aa17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 GNA15P30679 374 aa17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 RPS14P62263 151 aaKnown RBP17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 RPS24P62847 133 aaKnown RBP17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 YWHAZP63104 245 aaKnown RBP17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 FOXC1Q12948 553 aa17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 GRIK2Q13002 908 aa17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 GBP6Q6ZN66 633 aa17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 MLKLQ8NB16 471 aa17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 MYEOVQ96EZ4 313 aa17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 TMEM121BQ9BXQ6 578 aaPredicted RBP17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 NUCKS1Q9H1E3 243 aaKnown RBP17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 OSGEPQ9NPF4 335 aa17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 ASNSD1Q9NWL6 643 aa17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 ADAMTS9Q9P2N4 1935 aa17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 INTS6Q9UL03 887 aaKnown RBP17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 PCDHGC3Q9UN70 934 aa17.85■□□□□ 0.45
VPS9D1-203ENST00000563798 BCAT2O15382 392 aaPredicted RBP17.84■□□□□ 0.45
VPS9D1-203ENST00000563798 THAP12O43422 761 aa17.84■□□□□ 0.45
VPS9D1-203ENST00000563798 GLI1P08151 1106 aa17.84■□□□□ 0.45
VPS9D1-203ENST00000563798 ZNF883P0CG24 379 aa17.84■□□□□ 0.45
VPS9D1-203ENST00000563798 SLC9A1P19634 815 aa17.84■□□□□ 0.45
VPS9D1-203ENST00000563798 PDCLQ13371 301 aa17.84■□□□□ 0.45
VPS9D1-203ENST00000563798 EXOC3L4Q17RC7 722 aa17.84■□□□□ 0.45
VPS9D1-203ENST00000563798 GJB7Q6PEY0 223 aa17.84■□□□□ 0.45
VPS9D1-203ENST00000563798 WDTC1Q8N5D0 677 aa17.84■□□□□ 0.45
VPS9D1-203ENST00000563798 OR2I1PQ8NGU4 316 aa17.84■□□□□ 0.45
VPS9D1-203ENST00000563798 BTN2A3PQ96KV6 586 aa17.84■□□□□ 0.45
VPS9D1-203ENST00000563798 MRGPRX3Q96LB0 322 aa17.84■□□□□ 0.45
VPS9D1-203ENST00000563798 CRACR2AQ9BSW2 395 aa17.84■□□□□ 0.45
VPS9D1-203ENST00000563798 RSPH9Q9H1X1 276 aaPredicted RBP17.84■□□□□ 0.45
VPS9D1-203ENST00000563798 ACP6Q9NPH0 428 aa17.84■□□□□ 0.45
VPS9D1-203ENST00000563798 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.84■□□□□ 0.455e-9■□□□□ 10.9
VPS9D1-203ENST00000563798 SCML1Q9UN30 329 aa17.84■□□□□ 0.45
VPS9D1-203ENST00000563798 H0Y626 953 aa17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 CAPN9O14815 690 aa17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 LUC7L3O95232 432 aaKnown RBP17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 TRIM16O95361 564 aa17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 TRUB2O95900 331 aaKnown RBP17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 APOEP02649 317 aa17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 PON1P27169 355 aa17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 ACSL1P33121 698 aa17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 CSKP41240 450 aa17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 CAMK4Q16566 473 aa17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 HNRNPA1L2Q32P51 320 aaKnown RBP17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 DCAF6Q58WW2 860 aa17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 ZC3H12AQ5D1E8 599 aaKnown RBP17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 ZCCHC9Q8N567 271 aaKnown RBP17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 ZNF366Q8N895 744 aa17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 KDF1Q8NAX2 398 aaPredicted RBP17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 ADAM32Q8TC27 787 aa17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 SLC2A13Q96QE2 648 aa17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 ADAM33Q9BZ11 813 aa17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 STIM2Q9P246 746 aa17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 NEUROG3Q9Y4Z2 214 aa17.83■□□□□ 0.44
VPS9D1-203ENST00000563798 ITIH6Q6UXX5 1313 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms