RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 RUFY1Q96T51 708 aa10.04□□□□□ -0.8
UBFD1-202ENST00000563366 SEPT5Q99719 369 aaPredicted RBP10.04□□□□□ -0.8
UBFD1-202ENST00000563366 DPH5Q9H2P9 285 aa10.04□□□□□ -0.8
UBFD1-202ENST00000563366 MRPL17Q9NRX2 175 aaKnown RBP10.04□□□□□ -0.8
UBFD1-202ENST00000563366 PIGVQ9NUD9 493 aa10.04□□□□□ -0.8
UBFD1-202ENST00000563366 ZNF446Q9NWS9 450 aa10.04□□□□□ -0.8
UBFD1-202ENST00000563366 DONSONQ9NYP3 566 aa10.04□□□□□ -0.8
UBFD1-202ENST00000563366 FNIP2Q9P278 1114 aa10.04□□□□□ -0.8
UBFD1-202ENST00000563366 DNPEPQ9ULA0 475 aa10.04□□□□□ -0.8
UBFD1-202ENST00000563366 R3HDM2Q9Y2K5 976 aaKnown RBP10.04□□□□□ -0.8
UBFD1-202ENST00000563366 MRPL42Q9Y6G3 142 aaKnown RBP10.04□□□□□ -0.8
UBFD1-202ENST00000563366 SYNJ2BP-COX16A0A087WUM0 186 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 WDR27A2RRH5 827 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 HACD1B0YJ81 288 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 SGK1O00141 431 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 CDK2AP1O14519 115 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 IGLV3-25P01717 112 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 KRT14P02533 472 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 CSH1P0DML2 217 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 CSH2P0DML3 217 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 ACRP10323 421 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 RBP3P10745 1247 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 TFE3P19532 575 aaPredicted RBP10.03□□□□□ -0.8
UBFD1-202ENST00000563366 ADCY8P40145 1251 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 PPP3CCP48454 512 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 KPNA1P52294 538 aaPredicted RBP10.03□□□□□ -0.8
UBFD1-202ENST00000563366 MRPS25P82663 173 aaKnown RBP10.03□□□□□ -0.8
UBFD1-202ENST00000563366 ADCY2Q08462 1091 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 IFRD2Q12894 506 aaPredicted RBP10.03□□□□□ -0.8
UBFD1-202ENST00000563366 PLD1Q13393 1074 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 VEPH1Q14D04 833 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 DDR2Q16832 855 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 HSP90B2PQ58FF3 399 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 CFAP58Q5T655 872 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 ALS2CLQ60I27 953 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 FAM117BQ6P1L5 589 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 PRSS55Q6UWB4 352 aaPredicted RBP10.03□□□□□ -0.8
UBFD1-202ENST00000563366 ANKS1BQ7Z6G8 1248 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 CDKL3Q8IVW4 592 aaPredicted RBP10.03□□□□□ -0.8
UBFD1-202ENST00000563366 LINC00528Q8N1L1 170 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 ZNF276Q8N554 614 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 CCDC185Q8N715 623 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 ATAD1Q8NBU5 361 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 SCAMP5Q8TAC9 235 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 DQX1Q8TE96 717 aaKnown RBP10.03□□□□□ -0.8
UBFD1-202ENST00000563366 NDRG1Q92597 394 aaKnown RBP10.03□□□□□ -0.8
UBFD1-202ENST00000563366 EDEM1Q92611 657 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 ART4Q93070 314 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 FBXO32Q969P5 355 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 B3GALT6Q96L58 329 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 CSPG4P5Q96PW8 444 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 HAPLN3Q96S86 360 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 TTLL2Q9BWV7 592 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 TRIM31Q9BZY9 425 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 WDR6Q9NNW5 1121 aaKnown RBP10.03□□□□□ -0.8
UBFD1-202ENST00000563366 MED4Q9NPJ6 270 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 COX16Q9P0S2 106 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 TLR6Q9Y2C9 796 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 CLUHO75153 1309 aa10.03□□□□□ -0.8
UBFD1-202ENST00000563366 PLXNA4Q9HCM2 1894 aa10.02□□□□□ -0.8
UBFD1-202ENST00000563366 EEF2KO00418 725 aaKnown RBP10.02□□□□□ -0.81
UBFD1-202ENST00000563366 PPP1R12AO14974 1030 aaPredicted RBP10.02□□□□□ -0.81
UBFD1-202ENST00000563366 STK10O94804 968 aaKnown RBP10.02□□□□□ -0.81
UBFD1-202ENST00000563366 ABLIM3O94929 683 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 APOEP02649 317 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 EN2P19622 333 aaPredicted RBP10.02□□□□□ -0.81
UBFD1-202ENST00000563366 IL4RP24394 825 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 KLRC2P26717 231 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 ELF1P32519 619 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 HSPA9P38646 679 aaKnown RBP10.02□□□□□ -0.81
UBFD1-202ENST00000563366 RPL21P46778 160 aaKnown RBP10.02□□□□□ -0.81
UBFD1-202ENST00000563366 ALDH1A3P47895 512 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 SERPINB4P48594 390 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 PLTPP55058 493 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 TPI1P60174 286 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 PSMA6P60900 246 aaKnown RBP10.02□□□□□ -0.81
UBFD1-202ENST00000563366 DUSP4Q13115 394 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 RAB33AQ14088 237 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 CA9Q16790 459 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 RFX8Q6ZV50 586 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 TAC4Q86UU9 113 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 GSPT2Q8IYD1 628 aaKnown RBP10.02□□□□□ -0.81
UBFD1-202ENST00000563366 PLD5Q8N7P1 536 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 STKLD1Q8NE28 680 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 PCDH19Q8TAB3 1148 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 HERVK_113Q902F9 699 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 BADQ92934 168 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 TRMT2BQ96GJ1 504 aaKnown RBP10.02□□□□□ -0.81
UBFD1-202ENST00000563366 RAD9AQ99638 391 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 LBHD1Q9BQE6 289 aaPredicted RBP10.02□□□□□ -0.81
UBFD1-202ENST00000563366 UBE2OQ9C0C9 1292 aaKnown RBP10.02□□□□□ -0.81
UBFD1-202ENST00000563366 PHACTR1Q9C0D0 580 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 BRD8Q9H0E9 1235 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 TKTL2Q9H0I9 626 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 OSBPL2Q9H1P3 480 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 PLEKHA4Q9H4M7 779 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 ZDHHC18Q9NUE0 388 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 GPATCH2LQ9NWQ4 482 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 MTMR10Q9NXD2 777 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 ARHGEF38Q9NXL2 777 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms