RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 CXCL11O14625 94 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 EPB41L2O43491 1005 aaKnown RBP5.27□□□□□ -1.57
SMG1-206ENST00000562668 ASNSP08243 561 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 ATXN1LP0C7T5 689 aaKnown RBP5.27□□□□□ -1.57
SMG1-206ENST00000562668 CERS1P27544 350 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 PPIFP30405 207 aaKnown RBP5.27□□□□□ -1.57
SMG1-206ENST00000562668 ALDH9A1P49189 494 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 SLC44A4Q53GD3 710 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 EMC10Q5UCC4 262 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 ICE2Q659A1 982 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 ZNF66Q6ZN08 573 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 TMEM179Q6ZVK1 233 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 WDR53Q7Z5U6 358 aaPredicted RBP5.27□□□□□ -1.57
SMG1-206ENST00000562668 CATIPQ7Z7H3 387 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 FANCBQ8NB91 859 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 C12orf42Q96LP6 360 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 CCDC17Q96LX7 622 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 TTYH3Q9C0H2 523 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 TCP11L1Q9NUJ3 509 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 PNPOQ9NVS9 261 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 SH2B3Q9UQQ2 575 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 TMX2Q9Y320 296 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 COL11A1P12107 1806 aaPredicted RBP5.26□□□□□ -1.57
SMG1-206ENST00000562668 BTBD19C9JJ37 291 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 E7EWF7 191 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 DCLK1O15075 740 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 NMT2O60551 498 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 IL33O95760 270 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 IL6RP08887 468 aaPredicted RBP5.26□□□□□ -1.57
SMG1-206ENST00000562668 FAM163BP0C2L3 166 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 PCP11498 1178 aaKnown RBP5.26□□□□□ -1.57
SMG1-206ENST00000562668 EEF2P13639 858 aaKnown RBP5.26□□□□□ -1.57
SMG1-206ENST00000562668 HSPA4P34932 840 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 LIPAP38571 399 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 BACE1P56817 501 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 TFAP4Q01664 338 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 SPP2Q13103 211 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 IMMTQ16891 758 aaKnown RBP5.26□□□□□ -1.57
SMG1-206ENST00000562668 PGS1Q32NB8 556 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 ADCK5Q3MIX3 580 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 LONRF3Q496Y0 759 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 TREML2Q5T2D2 321 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 LAYNQ6UX15 382 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 CYB5R4Q7L1T6 521 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 NEK8Q86SG6 692 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 MB21D2Q8IYB1 491 aaPredicted RBP5.26□□□□□ -1.57
SMG1-206ENST00000562668 Q8N9P0 234 aaPredicted RBP5.26□□□□□ -1.57
SMG1-206ENST00000562668 NRIP3Q9NQ35 241 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 MTMR4Q9NYA4 1195 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 DLL3Q9NYJ7 618 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 NYAP2Q9P242 653 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 CTNNA3Q9UI47 895 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 PCDHA1Q9Y5I3 950 aa5.26□□□□□ -1.57
SMG1-206ENST00000562668 PLXNB2O15031 1838 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 CCL15-CCL14A0A0B4J2E2 113 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 TISP43B9A030 160 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 C19orf81C9J6K1 198 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 QSOX1O00391 747 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 DNAJB5O75953 348 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 ONECUT2O95948 504 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 POU2F2P09086 479 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 SNHG28P0DPA3 235 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 CETPP11597 493 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 KELP23276 732 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 HOXA7P31268 230 aaPredicted RBP5.25□□□□□ -1.57
SMG1-206ENST00000562668 NT5C2P49902 561 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 HMGCS2P54868 508 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 EEFSECP57772 596 aaKnown RBP5.25□□□□□ -1.57
SMG1-206ENST00000562668 ICA1Q05084 483 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 KLF9Q13886 244 aaPredicted RBP5.25□□□□□ -1.57
SMG1-206ENST00000562668 PLS1Q14651 629 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 CCL15Q16663 113 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 PRAMEF17Q5VTA0 474 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 MORN5Q5VZ52 161 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 MFSD6Q6ZSS7 791 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 RASGRP2Q7LDG7 609 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 ANKRD23Q86SG2 305 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 ZNF444Q8N0Y2 327 aaPredicted RBP5.25□□□□□ -1.57
SMG1-206ENST00000562668 PCSK9Q8NBP7 692 aaKnown RBP5.25□□□□□ -1.57
SMG1-206ENST00000562668 GTPBP4Q9BZE4 634 aaKnown RBP5.25□□□□□ -1.57
SMG1-206ENST00000562668 VCPKMTQ9H867 229 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 AS3MTQ9HBK9 375 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 ZCCHC17Q9NP64 241 aaKnown RBP5.25□□□□□ -1.57
SMG1-206ENST00000562668 RNF186Q9NXI6 227 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 SAGE1Q9NXZ1 904 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 SERTAD3Q9UJW9 196 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 AGTPBP1Q9UPW5 1226 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 SLC45A1Q9Y2W3 748 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 COL4A3BPQ9Y5P4 624 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 SNX14Q9Y5W7 946 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 MGAMO43451 1857 aa5.25□□□□□ -1.57
SMG1-206ENST00000562668 MPHOSPH10O00566 681 aaKnown RBP5.24□□□□□ -1.57
SMG1-206ENST00000562668 TP73O15350 636 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 RANBP6O60518 1105 aaKnown RBP5.24□□□□□ -1.57
SMG1-206ENST00000562668 CNMDO75829 334 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 UNC5CO95185 931 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 NDUFB10O96000 172 aa5.24□□□□□ -1.57
SMG1-206ENST00000562668 SLC3A2P08195 630 aaKnown RBP5.24□□□□□ -1.57
SMG1-206ENST00000562668 NHLRC4P0CG21 123 aaPredicted RBP5.24□□□□□ -1.57
SMG1-206ENST00000562668 TSPY3P0CV98 308 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms