RNA–Protein interactions for RNA: ENST00000561660.1

FANCA-206, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-206ENST00000561660 ATP1A3P13637 1013 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 HLA-EP13747 358 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 CHRNB2P17787 502 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 TFE3P19532 575 aaPredicted RBP18.65■□□□□ 0.58
FANCA-206ENST00000561660 TACR2P21452 398 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 DHPSP49366 369 aaPredicted RBP18.65■□□□□ 0.58
FANCA-206ENST00000561660 LMAN2Q12907 356 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 SYCP1Q15431 976 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 C2CD6Q53TS8 623 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 MBLAC2Q68D91 279 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 MMS22LQ6ZRQ5 1243 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 LGI2Q8N0V4 545 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 AOPEPQ8N6M6 819 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 BTN2A3PQ96KV6 586 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 SPACA7Q96KW9 195 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 DDX50Q9BQ39 737 aaKnown RBP18.65■□□□□ 0.58
FANCA-206ENST00000561660 PDCL3Q9H2J4 239 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 TMEM245Q9H330 911 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 SYNCQ9H7C4 482 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 FAM204AQ9H8W3 233 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 NLRC4Q9NPP4 1024 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 VPS45Q9NRW7 570 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 DDIT4Q9NX09 232 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 COX16Q9P0S2 106 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 INTS6Q9UL03 887 aaKnown RBP18.65■□□□□ 0.58
FANCA-206ENST00000561660 CEP83Q9Y592 693 aa18.65■□□□□ 0.58
FANCA-206ENST00000561660 MAP3K13O43283 966 aa18.64■□□□□ 0.57
FANCA-206ENST00000561660 COPAP53621 1224 aa18.64■□□□□ 0.57
FANCA-206ENST00000561660 NOMO3P69849 1222 aa18.64■□□□□ 0.57
FANCA-206ENST00000561660 BYSLQ13895 437 aaKnown RBP18.64■□□□□ 0.57
FANCA-206ENST00000561660 ANO6Q4KMQ2 910 aa18.64■□□□□ 0.57
FANCA-206ENST00000561660 ARMCX6Q7L4S7 300 aa18.64■□□□□ 0.57
FANCA-206ENST00000561660 LPCAT2Q7L5N7 544 aa18.64■□□□□ 0.57
FANCA-206ENST00000561660 CHSY1Q86X52 802 aa18.64■□□□□ 0.57
FANCA-206ENST00000561660 XYLT1Q86Y38 959 aa18.64■□□□□ 0.57
FANCA-206ENST00000561660 ZDHHC17Q8IUH5 632 aa18.64■□□□□ 0.57
FANCA-206ENST00000561660 MFN1Q8IWA4 741 aa18.64■□□□□ 0.57
FANCA-206ENST00000561660 AHI1Q8N157 1196 aa18.64■□□□□ 0.57
FANCA-206ENST00000561660 DEFB119Q8N690 84 aa18.64■□□□□ 0.57
FANCA-206ENST00000561660 NETO1Q8TDF5 533 aa18.64■□□□□ 0.57
FANCA-206ENST00000561660 CPA5Q8WXQ8 436 aa18.64■□□□□ 0.57
FANCA-206ENST00000561660 C18orf8Q96DM3 657 aa18.64■□□□□ 0.57
FANCA-206ENST00000561660 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.64■□□□□ 0.57
FANCA-206ENST00000561660 CDV3Q9UKY7 258 aaKnown RBP18.64■□□□□ 0.57
FANCA-206ENST00000561660 CYP8B1Q9UNU6 501 aa18.64■□□□□ 0.57
FANCA-206ENST00000561660 RALGAPA1Q6GYQ0 2036 aa18.64■□□□□ 0.57
FANCA-206ENST00000561660 THADAQ6YHU6 1953 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 PATE3B3GLJ2 98 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 LSM8O95777 96 aaKnown RBP18.63■□□□□ 0.57
FANCA-206ENST00000561660 EPHX1P07099 455 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 TPM2P07951 284 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 NOS2P35228 1153 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 SOX5P35711 763 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 MATKP42679 507 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 SNX16P57768 344 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 RNASE9P60153 205 aaKnown RBP18.63■□□□□ 0.57
FANCA-206ENST00000561660 FMO1Q01740 532 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 STARD3Q14849 445 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 NAA35Q5VZE5 725 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 TRNP1Q6NT89 227 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 CAVIN1Q6NZI2 390 aaKnown RBP18.63■□□□□ 0.57
FANCA-206ENST00000561660 KIAA1324Q6UXG2 1013 aaKnown RBP18.63■□□□□ 0.57
FANCA-206ENST00000561660 SERPINA13PQ6UXR4 307 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 DGLUCYQ7Z3D6 616 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 ERICH1Q86X53 443 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 DHX40Q8IX18 779 aaKnown RBP18.63■□□□□ 0.57
FANCA-206ENST00000561660 CARNMT1Q8N4J0 409 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 ZNF366Q8N895 744 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 NT5C3BQ969T7 300 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 TTC17Q96AE7 1141 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 MYO19Q96H55 970 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 ERGIC2Q96RQ1 377 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 NPY6RQ99463 290 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 ANLNQ9NQW6 1124 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 TMEM74BQ9NUR3 256 aa18.63■□□□□ 0.57
FANCA-206ENST00000561660 DCDC2BA2VCK2 349 aa18.62■□□□□ 0.57
FANCA-206ENST00000561660 I6L893 689 aaPredicted RBP18.62■□□□□ 0.57
FANCA-206ENST00000561660 SLC30A4O14863 429 aa18.62■□□□□ 0.57
FANCA-206ENST00000561660 SYNCRIPO60506 623 aaKnown RBP18.62■□□□□ 0.57
FANCA-206ENST00000561660 FOXD2O60548 495 aaPredicted RBP18.62■□□□□ 0.57
FANCA-206ENST00000561660 ZNF217O75362 1048 aa18.62■□□□□ 0.57
FANCA-206ENST00000561660 LUC7L3O95232 432 aaKnown RBP18.62■□□□□ 0.57
FANCA-206ENST00000561660 DLDP09622 509 aaKnown RBP18.62■□□□□ 0.57
FANCA-206ENST00000561660 CDK11BP21127 795 aaKnown RBP18.62■□□□□ 0.57
FANCA-206ENST00000561660 CCR1P32246 355 aa18.62■□□□□ 0.57
FANCA-206ENST00000561660 CDR2Q01850 454 aa18.62■□□□□ 0.57
FANCA-206ENST00000561660 UBXN1Q04323 297 aa18.62■□□□□ 0.57
FANCA-206ENST00000561660 NME3Q13232 169 aa18.62■□□□□ 0.57
FANCA-206ENST00000561660 AASDHQ4L235 1098 aaPredicted RBP18.62■□□□□ 0.57
FANCA-206ENST00000561660 SPDYCQ5MJ68 293 aa18.62■□□□□ 0.57
FANCA-206ENST00000561660 FBXL22Q6P050 247 aa18.62■□□□□ 0.57
FANCA-206ENST00000561660 ERMP1Q7Z2K6 904 aa18.62■□□□□ 0.57
FANCA-206ENST00000561660 CYP2U1Q7Z449 544 aa18.62■□□□□ 0.57
FANCA-206ENST00000561660 METTL3Q86U44 580 aaKnown RBP18.62■□□□□ 0.57
FANCA-206ENST00000561660 CIR1Q86X95 450 aaPredicted RBP18.62■□□□□ 0.57
FANCA-206ENST00000561660 TMPRSS6Q8IU80 811 aa18.62■□□□□ 0.57
FANCA-206ENST00000561660 ATP6V0D2Q8N8Y2 350 aa18.62■□□□□ 0.57
FANCA-206ENST00000561660 PIGKQ92643 395 aa18.62■□□□□ 0.57
FANCA-206ENST00000561660 FUCA2Q9BTY2 467 aa18.62■□□□□ 0.57
FANCA-206ENST00000561660 PRDM16Q9HAZ2 1276 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms