RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 FAM153AQ9UHL3 310 aa23.05■■□□□ 1.28
SNX22-205ENST00000560945 IRF1P10914 325 aa23.05■■□□□ 1.28
SNX22-205ENST00000560945 MYL4P12829 197 aa23.05■■□□□ 1.28
SNX22-205ENST00000560945 ZFXP17010 805 aaPredicted RBP23.05■■□□□ 1.28
SNX22-205ENST00000560945 CCR2P41597 374 aa23.05■■□□□ 1.28
SNX22-205ENST00000560945 MLLT6P55198 1093 aaPredicted RBP23.05■■□□□ 1.28
SNX22-205ENST00000560945 STXBP5Q5T5C0 1151 aa23.05■■□□□ 1.28
SNX22-205ENST00000560945 RAP1GAP2Q684P5 730 aa23.05■■□□□ 1.28
SNX22-205ENST00000560945 NADSYN1Q6IA69 706 aa23.05■■□□□ 1.28
SNX22-205ENST00000560945 DARS2Q6PI48 645 aaKnown RBP23.05■■□□□ 1.28
SNX22-205ENST00000560945 CDK5RAP1Q96SZ6 601 aaKnown RBP23.05■■□□□ 1.28
SNX22-205ENST00000560945 FRMD8P1Q9BZ68 369 aaPredicted RBP23.05■■□□□ 1.28
SNX22-205ENST00000560945 ZNF446Q9NWS9 450 aa23.05■■□□□ 1.28
SNX22-205ENST00000560945 SMPD4Q9NXE4 827 aa23.05■■□□□ 1.28
SNX22-205ENST00000560945 ASIC3Q9UHC3 531 aa23.05■■□□□ 1.28
SNX22-205ENST00000560945 LAMA3Q16787 3333 aa23.05■■□□□ 1.28
SNX22-205ENST00000560945 E9PAM4 449 aa23.04■■□□□ 1.28
SNX22-205ENST00000560945 GAS8O95995 478 aa23.04■■□□□ 1.28
SNX22-205ENST00000560945 IFNB1P01574 187 aa23.04■■□□□ 1.28
SNX22-205ENST00000560945 SLC2A3P11169 496 aa23.04■■□□□ 1.28
SNX22-205ENST00000560945 IVDP26440 423 aa23.04■■□□□ 1.28
SNX22-205ENST00000560945 PAFAH1B3Q15102 231 aaKnown RBP23.04■■□□□ 1.28
SNX22-205ENST00000560945 ZDHHC24Q6UX98 284 aa23.04■■□□□ 1.28
SNX22-205ENST00000560945 ZNF683Q8IZ20 524 aa23.04■■□□□ 1.28
SNX22-205ENST00000560945 ARL14EPQ8N8R7 260 aaPredicted RBP23.04■■□□□ 1.28
SNX22-205ENST00000560945 ATP6V0D2Q8N8Y2 350 aa23.04■■□□□ 1.28
SNX22-205ENST00000560945 FAM71DQ8N9W8 422 aa23.04■■□□□ 1.28
SNX22-205ENST00000560945 OLFM3Q96PB7 478 aa23.04■■□□□ 1.28
SNX22-205ENST00000560945 ARGLU1Q9NWB6 273 aaPredicted RBP23.04■■□□□ 1.28
SNX22-205ENST00000560945 MPP6Q9NZW5 540 aa23.04■■□□□ 1.28
SNX22-205ENST00000560945 VANGL2Q9ULK5 521 aa23.04■■□□□ 1.28
SNX22-205ENST00000560945 HBS1LQ9Y450 684 aaKnown RBP23.04■■□□□ 1.28
SNX22-205ENST00000560945 ATG2AQ2TAZ0 1938 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 A0A1W2PRU2 124 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 TUBBP07437 444 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 MCM3P25205 808 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 RBL1P28749 1068 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 TUBP50607 506 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 RING1Q06587 406 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 HLTFQ14527 1009 aaKnown RBP eCLIP23.03■■□□□ 1.28
SNX22-205ENST00000560945 BEND6Q5SZJ8 279 aaPredicted RBP23.03■■□□□ 1.28
SNX22-205ENST00000560945 KLHDC10Q6PID8 442 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 TMCO3Q6UWJ1 677 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 TADA2BQ86TJ2 420 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 ZFRQ96KR1 1074 aaKnown RBP23.03■■□□□ 1.28
SNX22-205ENST00000560945 BTN2A3PQ96KV6 586 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 KLF16Q9BXK1 252 aaPredicted RBP23.03■■□□□ 1.28
SNX22-205ENST00000560945 NDFIP2Q9NV92 336 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 HCFC2Q9Y5Z7 792 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 MYO7AQ13402 2215 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 SCAMP3O14828 347 aaKnown RBP23.03■■□□□ 1.28
SNX22-205ENST00000560945 PPP3CCP48454 512 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 ZXDBP98169 803 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 AUHQ13825 339 aaKnown RBP23.03■■□□□ 1.28
SNX22-205ENST00000560945 RAB30Q15771 203 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 TAB3Q8N5C8 712 aaPredicted RBP23.03■■□□□ 1.28
SNX22-205ENST00000560945 AENQ8WTP8 325 aaKnown RBP23.03■■□□□ 1.28
SNX22-205ENST00000560945 IGSF8Q969P0 613 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 TBC1D31Q96DN5 1066 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 TCEAL4Q96EI5 215 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 PRMT1Q99873 361 aaKnown RBP23.03■■□□□ 1.28
SNX22-205ENST00000560945 SLC28A3Q9HAS3 691 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 USP29Q9HBJ7 922 aa23.03■■□□□ 1.28
SNX22-205ENST00000560945 FEZ2Q9UHY8 353 aaPredicted RBP23.03■■□□□ 1.28
SNX22-205ENST00000560945 ANAPC1Q9H1A4 1944 aa23.02■■□□□ 1.28
SNX22-205ENST00000560945 TP73O15350 636 aa23.02■■□□□ 1.28
SNX22-205ENST00000560945 STC2O76061 302 aa23.02■■□□□ 1.28
SNX22-205ENST00000560945 KLKB1P03952 638 aa23.02■■□□□ 1.28
SNX22-205ENST00000560945 MBL2P11226 248 aaPredicted RBP23.02■■□□□ 1.28
SNX22-205ENST00000560945 HOXC13P31276 330 aa23.02■■□□□ 1.28
SNX22-205ENST00000560945 NTHL1P78549 312 aa23.02■■□□□ 1.28
SNX22-205ENST00000560945 SYDE1Q6ZW31 735 aaPredicted RBP23.02■■□□□ 1.28
SNX22-205ENST00000560945 ELMOD1Q8N336 334 aa23.02■■□□□ 1.28
SNX22-205ENST00000560945 RSAD2Q8WXG1 361 aa23.02■■□□□ 1.28
SNX22-205ENST00000560945 CELF6Q96J87 481 aaKnown RBP23.02■■□□□ 1.28
SNX22-205ENST00000560945 LGMNQ99538 433 aa23.02■■□□□ 1.28
SNX22-205ENST00000560945 KLC2Q9H0B6 622 aa23.02■■□□□ 1.28
SNX22-205ENST00000560945 ATXN3LQ9H3M9 355 aa23.02■■□□□ 1.28
SNX22-205ENST00000560945 FAM114A2Q9NRY5 505 aa23.02■■□□□ 1.28
SNX22-205ENST00000560945 DNMT3BQ9UBC3 853 aaKnown RBP23.02■■□□□ 1.28
SNX22-205ENST00000560945 OBSL1O75147 1896 aa23.02■■□□□ 1.28
SNX22-205ENST00000560945 VAV1P15498 845 aa23.01■■□□□ 1.27
SNX22-205ENST00000560945 NR2C2P49116 596 aa23.01■■□□□ 1.27
SNX22-205ENST00000560945 LMNB2Q03252 620 aa23.01■■□□□ 1.27
SNX22-205ENST00000560945 CIR1Q86X95 450 aaPredicted RBP23.01■■□□□ 1.27
SNX22-205ENST00000560945 MAB21L3Q8N8X9 362 aa23.01■■□□□ 1.27
SNX22-205ENST00000560945 ADAMTS19Q8TE59 1207 aa23.01■■□□□ 1.27
SNX22-205ENST00000560945 HNRNPLLQ8WVV9 542 aaKnown RBP23.01■■□□□ 1.27
SNX22-205ENST00000560945 C1orf74Q96LT6 269 aa23.01■■□□□ 1.27
SNX22-205ENST00000560945 ASAH2Q9NR71 780 aa23.01■■□□□ 1.27
SNX22-205ENST00000560945 ZDHHC18Q9NUE0 388 aa23.01■■□□□ 1.27
SNX22-205ENST00000560945 KCNN4O15554 427 aa23.01■■□□□ 1.27
SNX22-205ENST00000560945 CNTN5O94779 1100 aa23.01■■□□□ 1.27
SNX22-205ENST00000560945 SLC6A4P31645 630 aa23.01■■□□□ 1.27
SNX22-205ENST00000560945 ADCY8P40145 1251 aa23.01■■□□□ 1.27
SNX22-205ENST00000560945 NRIP1P48552 1158 aa23.01■■□□□ 1.27
SNX22-205ENST00000560945 PLTPP55058 493 aa23.01■■□□□ 1.27
SNX22-205ENST00000560945 NRG1Q02297 640 aaPredicted RBP23.01■■□□□ 1.27
SNX22-205ENST00000560945 CUL1Q13616 776 aa23.01■■□□□ 1.27
SNX22-205ENST00000560945 PABPC1LQ4VXU2 614 aaKnown RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms