RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 HEMGNQ9BXL5 484 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 SIK2Q9H0K1 926 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 RETREG1Q9H6L5 497 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 CATSPERBQ9H7T0 1116 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 CCSER2Q9H7U1 834 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 PCDH18Q9HCL0 1135 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 TRPC7Q9HCX4 862 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 RBM12Q9NTZ6 932 aaKnown RBP6.65□□□□□ -1.34
SPG11-221ENST00000560299 KLHL11Q9NVR0 708 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 GPATCH2LQ9NWQ4 482 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 LSM7Q9UK45 103 aaKnown RBP6.65□□□□□ -1.34
SPG11-221ENST00000560299 NUDT5Q9UKK9 219 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 LHX6Q9UPM6 363 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 RAD54BQ9Y620 910 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 TYW5A2RUC4 315 aaKnown RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 FAM187AA6NFU0 413 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 LOC730098B7Z3J9 87 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 F5H5T6 163 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 NDC80O14777 642 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 MCF2LO15068 1137 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 NCAM2O15394 837 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 FGF10O15520 208 aaPredicted RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 MSI1O43347 362 aaKnown RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 MBTPS2O43462 519 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 PAGE1O75459 146 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 TADA3O75528 432 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 RFPL2O75678 378 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 LATS1O95835 1130 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 GAS8O95995 478 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 MOCS2O96007 188 aaPredicted RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 CKMP06732 381 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 RHOP08100 348 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 HMBSP08397 361 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 KRT10P13645 584 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 MX2P20592 715 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 KCNA5P22460 613 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 EPHB2P29323 1055 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 STIP1P31948 543 aaKnown RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 ACTN2P35609 894 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 AVPR1AP37288 418 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 PGFP49763 221 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 SLC7A9P82251 487 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 NRG1Q02297 640 aaPredicted RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 C2orf54Q08AI8 447 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 KLF1Q13351 362 aaPredicted RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 DHX34Q14147 1143 aaKnown RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 LLGL1Q15334 1064 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 CYP1B1Q16678 543 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 RAB6CQ53S08 254 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 RABGAP1LQ5R372 815 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 GPR158Q5T848 1215 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 OTUD1Q5VV17 481 aaPredicted RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 TXNDC8Q6A555 127 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 RWDD4Q6NW29 188 aaKnown RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 AADACL2Q6P093 401 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 DRICH1Q6PGQ1 229 aaPredicted RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 CCDC137Q6PK04 289 aaKnown RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 TMCO3Q6UWJ1 677 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 RFX8Q6ZV50 586 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 SYDE1Q6ZW31 735 aaPredicted RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 CYP4V2Q6ZWL3 525 aaPredicted RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 GAREM2Q75VX8 874 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 GSTA5Q7RTV2 222 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 KLHL7Q8IXQ5 586 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 ZDHHC14Q8IZN3 488 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 HS6ST3Q8IZP7 471 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 LZTR1Q8N653 840 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 GPR161Q8N6U8 529 aaKnown RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 MAB21L3Q8N8X9 362 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 C12orf50Q8NA57 414 aaPredicted RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 ATL2Q8NHH9 583 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 CCHCR1Q8TD31 782 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 SMG7Q92540 1137 aaKnown RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 RUBCNQ92622 972 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 FAF2Q96CS3 445 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 TBC1D31Q96DN5 1066 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 CSPG4P5Q96PW8 444 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 KCTD15Q96SI1 283 aaPredicted RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 KRT12Q99456 494 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 PHF7Q9BWX1 381 aaPredicted RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 KLF16Q9BXK1 252 aaPredicted RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 LRRC3Q9BY71 257 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 ADAM33Q9BZ11 813 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 RAB6CQ9H0N0 254 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 RAB17Q9H0T7 212 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 IGFLR1Q9H665 355 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 TASP1Q9H6P5 420 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 LRRC19Q9H756 370 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 IL21Q9HBE4 155 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 ZNF334Q9HCZ1 680 aaPredicted RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 CLDND1Q9NY35 253 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 CWC15Q9P013 229 aaKnown RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 CALCOCO1Q9P1Z2 691 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 PCYOX1Q9UHG3 505 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 ZNF148Q9UQR1 794 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 DRG1Q9Y295 367 aaKnown RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 UTP11Q9Y3A2 253 aaKnown RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 MRPS23Q9Y3D9 190 aaKnown RBP6.64□□□□□ -1.35
SPG11-221ENST00000560299 SH3BP1Q9Y3L3 701 aa6.64□□□□□ -1.35
SPG11-221ENST00000560299 ANAPC1Q9H1A4 1944 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms