RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 UCMAQ8WVF2 138 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 CPA5Q8WXQ8 436 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 BAP1Q92560 729 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 TTC17Q96AE7 1141 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 PDCL3Q9H2J4 239 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 TMEM245Q9H330 911 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 PARD6AQ9NPB6 346 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 DDIT4Q9NX09 232 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 ARHGEF38Q9NXL2 777 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMAD3-213ENST00000560175 GMEB2Q9UKD1 530 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 PCDHGA5Q9Y5G8 931 aa13.69□□□□□ -0.22
SMAD3-213ENST00000560175 TCRBV21S2A2A0A5A6 115 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 M0QYT0 321 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 DCLK1O15075 740 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 TBL1XO60907 577 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 EPN2O95208 641 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 F9P00740 461 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 PABPC1P11940 636 aaKnown RBP13.68□□□□□ -0.22
SMAD3-213ENST00000560175 TACR2P21452 398 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 CENPCQ03188 943 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 ZNF234Q14588 700 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 LPAL2Q16609 132 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 PTPRNQ16849 979 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 SKOR2Q2VWA4 1001 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-213ENST00000560175 SPDYCQ5MJ68 293 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 BRMS1LQ5PSV4 323 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 PLA2G2CQ5R387 149 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 NAA35Q5VZE5 725 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 PMS2CLQ68D20 193 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 TRNP1Q6NT89 227 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 PHF13Q86YI8 300 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-213ENST00000560175 AHI1Q8N157 1196 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 C1orf74Q96LT6 269 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 TPSD1Q9BZJ3 242 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 EDEM3Q9BZQ6 932 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 TTYH3Q9C0H2 523 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 SYNCQ9H7C4 482 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 CBX8Q9HC52 389 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 ABCB8Q9NUT2 735 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 CACNA2D2Q9NY47 1150 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 SLC12A6Q9UHW9 1150 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 GGA2Q9UJY4 613 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 INTS6Q9UL03 887 aaKnown RBP13.68□□□□□ -0.22
SMAD3-213ENST00000560175 GON4LQ3T8J9 2241 aa13.68□□□□□ -0.22
SMAD3-213ENST00000560175 I6L893 689 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-213ENST00000560175 RHOBTB1O94844 696 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 DLDP09622 509 aaKnown RBP13.67□□□□□ -0.22
SMAD3-213ENST00000560175 TFE3P19532 575 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-213ENST00000560175 ABCB4P21439 1286 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 CD70P32970 193 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 FLT3P36888 993 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 PBX1P40424 430 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 WASP42768 502 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 PLK1P53350 603 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 CAMK2GQ13555 558 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-213ENST00000560175 BYSLQ13895 437 aaKnown RBP13.67□□□□□ -0.22
SMAD3-213ENST00000560175 ARID5BQ14865 1188 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 CSRP2Q16527 193 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 CLEC16AQ2KHT3 1053 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 FILIP1LQ4L180 1135 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 C2CD6Q53TS8 623 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 FSCBQ5H9T9 825 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 FIGNQ5HY92 759 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 ACBD5Q5T8D3 534 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-213ENST00000560175 RAP1GAP2Q684P5 730 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 CHST9Q7L1S5 443 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 ZNF683Q8IZ20 524 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 KDM1BQ8NB78 822 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 MSANTD4Q8NCY6 345 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 HMGB4Q8WW32 186 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 MYO19Q96H55 970 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 MRGPRX1Q96LB2 322 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 FAM204AQ9H8W3 233 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 ANLNQ9NQW6 1124 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 PIGVQ9NUD9 493 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 AIPL1Q9NZN9 384 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 MBD1Q9UIS9 605 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-213ENST00000560175 STAP1Q9ULZ2 295 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 PI4KAP42356 2102 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 LAMA1P25391 3075 aa13.67□□□□□ -0.22
SMAD3-213ENST00000560175 TCRBV5S1A1TA0A578 114 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 FOXD2O60548 495 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-213ENST00000560175 PAGE1O75459 146 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 LUC7L3O95232 432 aaKnown RBP13.66□□□□□ -0.22
SMAD3-213ENST00000560175 MOCS2O96007 188 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-213ENST00000560175 ZNF806P0C7X5 589 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 FERP16591 822 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 NDUFV2P19404 249 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 BCKDHBP21953 392 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 VASPP50552 380 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-213ENST00000560175 COPAP53621 1224 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 SPEM2Q0P670 501 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 LMAN2Q12907 356 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 SLC12A1Q13621 1099 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 AUHQ13825 339 aaKnown RBP13.66□□□□□ -0.22
SMAD3-213ENST00000560175 FUT11Q495W5 492 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 FAM102AQ5T9C2 384 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-213ENST00000560175 TTC39BQ5VTQ0 682 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-213ENST00000560175 MBLAC2Q68D91 279 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms