RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 SIK2Q9H0K1 926 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 WDCPQ9H6R7 721 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 TBC1D17Q9HA65 648 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 ZDHHC4Q9NPG8 344 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 C2orf42Q9NWW7 574 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 PCSK1NQ9UHG2 260 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 INTUQ9ULD6 942 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 VANGL2Q9ULK5 521 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 FZD10Q9ULW2 581 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 ADGRG1Q9Y653 693 aa11.28□□□□□ -0.6
TPM1-217ENST00000559108 ZNF318Q5VUA4 2279 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 TMEM221A6NGB7 291 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 TMEM110-MUSTN1A8MSY1 372 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 M0R296 226 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 PJA2O43164 708 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 CACNG3O60359 315 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 TULP3O75386 442 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 PROSCO94903 275 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 EGFP01133 1207 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 MARCKSL1P49006 195 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 GALK1P51570 392 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 VAV2P52735 878 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 MLLT6P55198 1093 aaPredicted RBP11.27□□□□□ -0.61
TPM1-217ENST00000559108 PFKPQ01813 784 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 SCAPQ12770 1279 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 GAS6Q14393 721 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 ANO4Q32M45 955 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 C5orf22Q49AR2 442 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 FSCBQ5H9T9 825 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 TMEM215Q68D42 235 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 SCYL2Q6P3W7 929 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 ANKS1BQ7Z6G8 1248 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 CCDC105Q8IYK2 499 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 RNF34Q969K3 372 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 PPP1R9BQ96SB3 815 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 KCTD15Q96SI1 283 aaPredicted RBP11.27□□□□□ -0.61
TPM1-217ENST00000559108 MRPL47Q9HD33 250 aaKnown RBP11.27□□□□□ -0.61
TPM1-217ENST00000559108 LTB4R2Q9NPC1 389 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 NDFIP2Q9NV92 336 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 KLHL11Q9NVR0 708 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 POLR3BQ9NW08 1133 aaPredicted RBP11.27□□□□□ -0.61
TPM1-217ENST00000559108 MPP6Q9NZW5 540 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 UVRAGQ9P2Y5 699 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 FBXO10Q9UK96 956 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 FBXL21Q9UKT6 434 aa11.27□□□□□ -0.61
TPM1-217ENST00000559108 MYO18AQ92614 2054 aaKnown RBP11.27□□□□□ -0.61
TPM1-217ENST00000559108 IGLV3-10A0A075B6K4 115 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 PRRT4C9JH25 899 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 E9PAM4 449 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 BUB1O43683 1085 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 BUB1BO60566 1050 aaPredicted RBP11.26□□□□□ -0.61
TPM1-217ENST00000559108 TBL1XO60907 577 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 ADH1CP00326 375 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 F9P00740 461 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 RARAP10276 462 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 CHRNB1P11230 501 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 HLA-FP30511 346 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 CD70P32970 193 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 SLC11A2P49281 568 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 HADHBP55084 474 aaKnown RBP11.26□□□□□ -0.61
TPM1-217ENST00000559108 GAD2Q05329 585 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 CCINQ13939 588 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 MESDQ14696 234 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 SPA17Q15506 151 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 GEN1Q17RS7 908 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 SMTNL2Q2TAL5 461 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 TMEM196Q5HYL7 178 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 KCNT1Q5JUK3 1230 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 C10orf76Q5T2E6 689 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 CXorf57Q6NSI4 855 aaKnown RBP11.26□□□□□ -0.61
TPM1-217ENST00000559108 Q6ZS52 159 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 RALGPS2Q86X27 583 aaPredicted RBP11.26□□□□□ -0.61
TPM1-217ENST00000559108 ATP6V0D2Q8N8Y2 350 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 FAM3CQ92520 227 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 HAPLN3Q96S86 360 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 ZWILCHQ9H900 591 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 DNAJC17Q9NVM6 304 aaKnown RBP11.26□□□□□ -0.61
TPM1-217ENST00000559108 DLGAP2Q9P1A6 1054 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 STIM2Q9P246 746 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 IP6K2Q9UHH9 426 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 INTS6Q9UL03 887 aaKnown RBP11.26□□□□□ -0.61
TPM1-217ENST00000559108 USP18Q9UMW8 372 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 NDRG2Q9UN36 371 aaKnown RBP11.26□□□□□ -0.61
TPM1-217ENST00000559108 ZNF510Q9Y2H8 683 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 MFHAS1Q9Y4C4 1052 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 NUP205Q92621 2012 aa11.26□□□□□ -0.61
TPM1-217ENST00000559108 ZDBF2Q9HCK1 2354 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 GRID2IPA4D2P6 1211 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 DRGXA6NNA5 263 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 K7EQS6 105 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 ARHGAP6O43182 974 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 LRIG2O94898 1065 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 CD48P09326 243 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 SLC2A3P11169 496 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 ALADP13716 330 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 CHKAP35790 457 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 ARSEP51690 589 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 PRKCQQ04759 706 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 MPPE1Q53F39 396 aa11.25□□□□□ -0.61
TPM1-217ENST00000559108 EMC10Q5UCC4 262 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms